Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g240 ATGTTTGTGGAGTGCAGAGGAACATATGCCTGGTCTTCAAAAGTATGCCTTATTTTCCTGCAAGTGTTTGCCCTCACCATTTCTATGGAAGAATCGGTAGCTCTGGCTTCTGATGGTGTTTTTGGTAATTCAGAAAGCGTCATCAATCGTAAACCTGCTCGAAGGAAGCTAGATGACATAGCTGGCTCCATAAACATAGACTGCGGGCTACCTGAAGATTGCAAGTACATTGATGCCGAAACTGGGTTACAGTACACTTCAGATGCAAGCTTCATCAGATCCGGAATAAATAAGAACATATCATCCAAGTTCAGCTCTACAACTCTTCATAAGTCTCTCACAAATGTTAGAAGCTTCCCTCAAGGGAAAAGGAATTGTTACACACTGAGACCTCCAGAAGGCCATGGCACTATGTATTTGATCAGAGCTTCCTTCATGTATGGAAACTATGATGAACTCAACCAGGTTCCACAGTTTGATCTTTATATTGGAGTTAACATGTGGGATTCTGTGAAGCTGGACAATGCATCTCATCTTGTGATGAAGGAGATTCTACATGCTCCCTCAGATGATGATATCTATGTATGTCTTGTAAATATCGGTTATGGAGAACCATTTATATCATCACTGGAAGTAAGGCATTTTCATGATTCTAGTTATAAGACTGAGTCTGGATCACTAGCTTTATACAGGCGGCTCGATGCTGGTTCAACAACCAATGAGATAGTCAGGTTCAAAGACGACGCTTATGATCGAATTTGGTTTCCTTATAATTTGCCTGACTGTGAATCACTCAATACAACAGTGCCCATTGATTCCCATGCTGAAACTGAGTATAAACTGCCATCAAAGGTCATGACCACTGCCATTAGGCCAATGAATAGCAGTGCCTCATTGGACTTTGATTTCGATATCGGTGATTCCACTCTGGAGTTTTATGTGTACATGCACTTTGCAGAACTTGAGGGGCTGCAGGAAAACCAGACTAGAAATTTCAGCATTACCCTGAATGGTAACCCCTGGGGGGAAGCTAATATTGTTCCCAAGTACCTGCACTCAAGAACTGTAAATAACAAACAGCCAGTGAGGGGATCCAAGCTGAAGTTTTCTATTTATAAGACATTGAATTCTTCCCTTCCTCCGATCCTAAATGCCATGGAGATTTACATGGTGAAAGGTCTCTTACAGGCGCCAACTTGCCAAGAAGATGTAAATGGTATCTCGAGAATCAAATCATTCTATCTTGTTGAGAAGAACTGGCAAGGAGATCCATGTGCCCCAGTGCAACCTTGGGATGGCCTCACCTGCAGTAACAATGGTTATGAATCACCCAGAATCATCTCTCTGAAACTGTCCTCAAGTGGATTGAGAGGCACGATATCTCCTTCACTGTTGAATCTCACAGCATTACAGTTCCTGGATTTGTCGAACAATAGCCTAACAGGAGAACTGCCTGAATTTTTGTCACGACTGTCATTCTTGACTGCCCTGAATGTTACAGGAAACAAGCTCTCGGGTTCAGTTCCTCCAGATCTCATTGCAAGATCAGAGAAAGGGTCACTGTCATTGAGTGTGGCCAACAACCCGGATCTTTGTCCATCGGCTCAATGCAAAGAGAATAAGAACTCTGTCGGTCCAATAGTTGCAGCAGTAGTTTCATCACTTGTCATCATCTTCCTTGCATTGGTTATTATATGGAGCCTAAAAAGAAGGAAAAAAGCTACAAAATCACTTGTCAGATCTCCTGAAGAAACATGGTCACTAAAGATGGAGAACCAACGATTCAGATACTTAGAGATTGTGAGTATTACCAATGACTTTCAAACAGTCCTTGGGACGGGAGGATTTGGAACCGTTTACCATGGCTGCATGCTTAATGGCACACAAGTTGCTATCAAGATGCTCTCTCAATCATCAAAACAAGGAATGAAGGAGTTTCGCAATGAGGCTAGGCTCTTGATGAGAGTTCACCACAGAAACTTGGCTTCTCTGGTTGGGTACTGCCATGAAGGTACAAACATGGGGCTCATCTATGAGTACATGGCTGGTGGGAACTTACAAAATTATCTATCAGGGGCAGATATAAGCACTAGTCCTTTGAGTTGGATAGAGAGACTTCAAATAGCAGTGGATGCAGCACAAGGACTAGAATACATGCACTGTGGTTGCAAGCCACCTATAATCCACAGAGATGTGAAAACTGCCAACATTTTGTTGAGTGAAAAACTGCAAGCTAAGATAGCTGATTTTGGGTTCTCAAGATTTTTCTCAATTGAGAGTGAAACTCATGCCACAACTGCAGTTGTTGGCACTATTGGTTACATTGATCCAGAGTACTACATATCTAATAGGTTGACCGAGAAAAGTGATGTTTATAGCTTTGGAATTGTTCTATTGGAGTTGATAACTGGAAAACCTGCAATCATTAAAGATGAAGACAATATTCATATAGTTCAATGGGTAAGGTCTTTTGTGGAGAGAGGGGACATTGGAAGCATTGTTGATCCCAGGCTACAAGGAAATTTGAACACAAATTCAGTTTGGAGAGTTTTGGAGACAGCAATGGCATGCCTACCACCAATTTCCATCCAAAGGGTGACTATGAGTCATGTAGTGATGCAACTAAAGGAGTGTTTGGAAGAAGAGAAAGCTCATGATCAAACTAGAAGGATGGAGGAACAGGCCACAAAATCAAGCAATTTGATTGACTTATATAGTTTGGATCTTGAACTTGAAATGGGTCCAGAAGCAAGATAA 2757 41.82 MFVECRGTYAWSSKVCLIFLQVFALTISMEESVALASDGVFGNSESVINRKPARRKLDDIAGSINIDCGLPEDCKYIDAETGLQYTSDASFIRSGINKNISSKFSSTTLHKSLTNVRSFPQGKRNCYTLRPPEGHGTMYLIRASFMYGNYDELNQVPQFDLYIGVNMWDSVKLDNASHLVMKEILHAPSDDDIYVCLVNIGYGEPFISSLEVRHFHDSSYKTESGSLALYRRLDAGSTTNEIVRFKDDAYDRIWFPYNLPDCESLNTTVPIDSHAETEYKLPSKVMTTAIRPMNSSASLDFDFDIGDSTLEFYVYMHFAELEGLQENQTRNFSITLNGNPWGEANIVPKYLHSRTVNNKQPVRGSKLKFSIYKTLNSSLPPILNAMEIYMVKGLLQAPTCQEDVNGISRIKSFYLVEKNWQGDPCAPVQPWDGLTCSNNGYESPRIISLKLSSSGLRGTISPSLLNLTALQFLDLSNNSLTGELPEFLSRLSFLTALNVTGNKLSGSVPPDLIARSEKGSLSLSVANNPDLCPSAQCKENKNSVGPIVAAVVSSLVIIFLALVIIWSLKRRKKATKSLVRSPEETWSLKMENQRFRYLEIVSITNDFQTVLGTGGFGTVYHGCMLNGTQVAIKMLSQSSKQGMKEFRNEARLLMRVHHRNLASLVGYCHEGTNMGLIYEYMAGGNLQNYLSGADISTSPLSWIERLQIAVDAAQGLEYMHCGCKPPIIHRDVKTANILLSEKLQAKIADFGFSRFFSIESETHATTAVVGTIGYIDPEYYISNRLTEKSDVYSFGIVLLELITGKPAIIKDEDNIHIVQWVRSFVERGDIGSIVDPRLQGNLNTNSVWRVLETAMACLPPISIQRVTMSHVVMQLKECLEEEKAHDQTRRMEEQATKSSNLIDLYSLDLELEMGPEAR* 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2679370 2685354 + Vvi9g240 Vvi9g240 791951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g240 918 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Vvi9g240 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Vvi9g240 918 SUPERFAMILY Protein kinase-like (PK-like) 584 875 IPR011009 -
Vvi9g240 918 SUPERFAMILY L domain-like 406 512 - -
Vvi9g240 918 ProSiteProfiles Protein kinase domain profile. 605 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g240 918 CDD STKc_IRAK 611 877 - -
Vvi9g240 918 Gene3D Phosphorylase Kinase; domain 1 587 680 - -
Vvi9g240 918 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 23 918 - -
Vvi9g240 918 Gene3D Ribonuclease Inhibitor 408 527 IPR032675 -
Vvi9g240 918 Pfam Malectin-like domain 66 391 IPR024788 -
Vvi9g240 918 SMART serkin_6 605 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g240 918 Gene3D Transferase(Phosphotransferase) domain 1 681 903 - -
Vvi9g240 918 Pfam Protein tyrosine and serine/threonine kinase 607 807 IPR001245 GO:0004672|GO:0006468
Vvi9g240 918 PANTHER OS07G0107800 PROTEIN-RELATED 23 918 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76851 PF12819 Malectin_like 2.10E-115 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g240 - - vvi:100249701 1832.38