Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g268 ATGGGAAGAGCTACAAGGTGGTTGAGAGGCTTGTTGGGGATGAAGAAAGACAAGGAACAGGTGGAGAATTCCACCGCTGGTGACCGGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCCAGGGAGGGATACTTCTGGTGTGGGTCAGAACCCAGTCAACTTTCCGGCCAACATTCCGGTTGATTCCGCTTGGTTGAGATCTTACATTTCTGAGACAGAGAAAGAGCAGAACAAGCACGCAATTGCTGTGGCTGCAGCCACCGCAGCCGCTGCGGATGCTGCGGTGGCCGCAGCACAGGCTGCAGTGGCTGTGGTGAGGCTCACAAGCCATGGCAGAGGAACCCTCTTTGGTGGAGGCAGAGACAGGTGGGCTGCAACCAAGATTCAGACTGTTTTTAGGGGATATTTGGCCCGAAAGGCGCATAGAGCTTTGAAAGGATTGGTGAAGTTGCAGGCTCTTGTTAGGGGTTTTCTTGTTCGAAAGCGGGCTGCCGCAACCCTTCATAGTATGCAAGCTCTTATAAGGGCTCAGGCTGCTGTTCGATCCCAAAGAACTCTCCGTGCCCGCAACAAAGAAAACAGATTTCCACCAGAAATGAGGCCTAGAAGATCCATTGAAAGGTTTGAGGAAACCAGAAGTGAATTCCACAGTAAGAGGATGTCAACATCTTTTGAGACTTCAGTTAATGCATTTGATGAAAGCCCAAAGATCGTCGAAATCGATACATTCAAGCCCAAGTCAAGATCCCGCAGAATGATGAATACTTCAACCTCAGATTCAGGCGAAGACCCGCCATACCTAACACTCTCATCACCTCTTCCATACTTCGAATGGTGCTTCACTGGCGACGAATGTAGGTTCTCCACTGCCCAAAGCACTCCTCGGCTTGCAAACACTAGCCGAGCAGTGGCCCCAGTTACACCAGCCAAGAGCGTATGTGGGGACAGCTTCTTCCGGCCTTACTCCAACTTCCCCAACTATATGGCCAACACTCAATCATTCAAGGCCAAACTGAGGTCTCACAGTGCCCCAAAGCAAAGACCTGAGCCTGGCCCCAAAAGGCGGTTTTCCCTCAATGAAATAATGGCATCAAGGACTAGCCTAAGCGGGGTTCGAATGCAGAGATCATGTTCCCAATCAAAAGACATGGACGGTTTTGATAGGGGTTTCTCATCATCAATGCATAGTAAACCTTCTTCAATTCTCAAAATCTCAGAATCCGTTGGGCTTAATGAGAACAATCCAAACCGTAGTTTTCAGAACCCAAAGAAATCAACTACGAAGAACTTCATGTCACCAACGATTTCTGCAGCTTCCAAGGCTACTCTTCCAAGAAAGAAAATCTTGGCAGAGAGGAATGAAGCTTCTGGATCAATTTTATCAGATGCCCATTTCTCAAAAACCCCACAAGACGCTAAATCACCTGCTGATGTGGGTATCAATGGCTCCGATGGCCCTTTGTGTCGTACCACTCCGTTGTCATATCGGGCTTCTGAATCCGAAGGCGATGATCAGAATTCTGTGCCCGATTCGTCCTCGAGGCCTTATGACCCCTTAACGAATTACCTCTCCCCGAGGCCAAAGTTTCTCAGGTACAATCCCAACAGGCGACGAGAAATTTTCCTTCTCAAGGAAAATGAAATTGAAGACGGAAATGGTCGATTGAGTATCGGCAGAAGTGTTTCTTTTGAATCTCAGAATGCCAGTGATGAGGACGGTGCTCGTGATACTTCTTCTCAAGGAGGCTCTGTACAGCCAGAAGATGAGGAAATTGTTGAAGATGAGGAAGACATTGAGGAGGAAGAGGAGCAGAGAGGTTGGAGTTTGAAAGGGGTATTGAATACTCTGTTTGTATTTGTTCTTTTGGTCCTCTCCACATCATATATATCTTCAATGAATTCTCCCTCTCCCACACCTTCCCCTGCCATGGAAGCTATAGAGGGAATCAAAGATGGCTACTTGAAAATTCAGAGCCATATATTTGGAGCTGCCTCTGTGAAAGGTCTTGAAGATGGACTCTCACAAGCTATAGAGGGTGTTCAAAATGGGTATTTGAAGATTCAGAGCCATATGTTTGGAGCTACCTCTGTGAAGAATTCTGAAAGCGGAAGTGAATTCATGGAGCAACAAGAAGATAGGAAAATGGGTTTGATTGAAGCAAATCAGGGAGCTGTTGAAGGAGAGGTGGCTGGAGATGAAAATGGGGGAGTAGCAGAAGAAACTGATGAACTGGGTCAAGTGGTAGAGTTGCAGCAAGGGGAAGAAAATGAAGATCTTTGTGGCCGGGAAATGGGGAAAACACTGGACGTTTCTGATCGGATGGCTGCAAATTTGGAGTTTCAAGAGAAAACTGCAGAGAAGTTGGAAGCTTTTCAAGATGATCCGATACAGACTCCTGAACCAGTTGTTCCAGGTATTGCAGAAAAAGATGTGATGAATACTGATTCCATTTCTAAAGAGGAACAAGTAGAAGATGATTCAGATGTGGGGGGAGCTGGTAATGAAGAAATGGTTGCAGATGAAATTGAGGGAGTAGAAGACCTTACTAACAAGGAAAATACAAACGTTGGGGTTGCCAATCTTGAACCAGAGGTGAATTTGAAGGAGGGGGTTACTGAACCTGTGGAAACTGATTCAATTCCCAAAGTTGTCATTTGGGCTTCTATATTTGCCATCATTGTGGCACCTTTGGTGTTGGGATTTCATCTCAAGCGGGAAAAAACTCTGAAAAAGGATTCACCCATGACTGTGAATCAGTGTTCTGAGTCTCTGGTAGCAGAGAAAAGCTCAGTAGTAGTGGTACCACCCAATGGGGGTGAGGACCACATTGAGAAAGTTGAGTCCTATGCCGACCCTTCAGTGGAGGAAGCTTCCCAAGAGGTCTCTCACATTGAGAAAGTTGAGTCCTATGCAGACCCTTCAGTGGAGGAAGCTTCCCAAGAGTTCTCTCAAAGCCGAGCGCCAAAAGTGGAGCTACTTGGAGAATATGTGGTTGGGGAGGTCTGTAGTACTCCTAAGATATACAGCATGAAAAGTAGGATGATGATGGAAGGTGAAGAAAGCAACCATTATTCAGTTTCTCAAGAGAAAGGGGGGACTCATTCGATTCCTATTCGCACACAAGCGACTCTCTCAGCTCTTTCCACCATGGATTCCCCTTCATATGGTAGCTTCACTGCTGAGAAATCAATCAGGAAAAAAGAGGACGGCAGAGATGGAGAAGTGAAGAAGATAGTGACAACCCCAGTGAGGCGATCGAGCCGAATCCGCACCCGTGCAATCATGTCTCCATGA 3294 46.72 MGRATRWLRGLLGMKKDKEQVENSTAGDRKEKKRWSFAKPGRDTSGVGQNPVNFPANIPVDSAWLRSYISETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTLFGGGRDRWAATKIQTVFRGYLARKAHRALKGLVKLQALVRGFLVRKRAAATLHSMQALIRAQAAVRSQRTLRARNKENRFPPEMRPRRSIERFEETRSEFHSKRMSTSFETSVNAFDESPKIVEIDTFKPKSRSRRMMNTSTSDSGEDPPYLTLSSPLPYFEWCFTGDECRFSTAQSTPRLANTSRAVAPVTPAKSVCGDSFFRPYSNFPNYMANTQSFKAKLRSHSAPKQRPEPGPKRRFSLNEIMASRTSLSGVRMQRSCSQSKDMDGFDRGFSSSMHSKPSSILKISESVGLNENNPNRSFQNPKKSTTKNFMSPTISAASKATLPRKKILAERNEASGSILSDAHFSKTPQDAKSPADVGINGSDGPLCRTTPLSYRASESEGDDQNSVPDSSSRPYDPLTNYLSPRPKFLRYNPNRRREIFLLKENEIEDGNGRLSIGRSVSFESQNASDEDGARDTSSQGGSVQPEDEEIVEDEEDIEEEEEQRGWSLKGVLNTLFVFVLLVLSTSYISSMNSPSPTPSPAMEAIEGIKDGYLKIQSHIFGAASVKGLEDGLSQAIEGVQNGYLKIQSHMFGATSVKNSESGSEFMEQQEDRKMGLIEANQGAVEGEVAGDENGGVAEETDELGQVVELQQGEENEDLCGREMGKTLDVSDRMAANLEFQEKTAEKLEAFQDDPIQTPEPVVPGIAEKDVMNTDSISKEEQVEDDSDVGGAGNEEMVADEIEGVEDLTNKENTNVGVANLEPEVNLKEGVTEPVETDSIPKVVIWASIFAIIVAPLVLGFHLKREKTLKKDSPMTVNQCSESLVAEKSSVVVVPPNGGEDHIEKVESYADPSVEEASQEVSHIEKVESYADPSVEEASQEFSQSRAPKVELLGEYVVGEVCSTPKIYSMKSRMMMEGEESNHYSVSQEKGGTHSIPIRTQATLSALSTMDSPSYGSFTAEKSIRKKEDGRDGEVKKIVTTPVRRSSRIRTRAIMSP* 1098
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3030077 3040592 - Vvi9g268 Vvi9g268 791979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g268 1097 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Vvi9g268 1097 PANTHER - 384 1097 - -
Vvi9g268 1097 MobiDBLite consensus disorder prediction 409 430 - -
Vvi9g268 1097 MobiDBLite consensus disorder prediction 493 519 - -
Vvi9g268 1097 MobiDBLite consensus disorder prediction 558 585 - -
Vvi9g268 1097 MobiDBLite consensus disorder prediction 1047 1076 - -
Vvi9g268 1097 Pfam Protein of unknown function (DUF4005) 301 380 IPR025064 -
Vvi9g268 1097 SMART iq_5 120 142 IPR000048 GO:0005515
Vvi9g268 1097 SMART iq_5 143 164 IPR000048 GO:0005515
Vvi9g268 1097 MobiDBLite consensus disorder prediction 460 530 - -
Vvi9g268 1097 MobiDBLite consensus disorder prediction 587 602 - -
Vvi9g268 1097 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Vvi9g268 1097 MobiDBLite consensus disorder prediction 1061 1076 - -
Vvi9g268 1097 Pfam IQ calmodulin-binding motif 122 142 IPR000048 GO:0005515
Vvi9g268 1097 Pfam IQ calmodulin-binding motif 148 162 IPR000048 GO:0005515
Vvi9g268 1097 MobiDBLite consensus disorder prediction 16 39 - -
Vvi9g268 1097 MobiDBLite consensus disorder prediction 553 603 - -
Vvi9g268 1097 MobiDBLite consensus disorder prediction 16 51 - -
Vvi9g268 1097 PANTHER TRANSMEMBRANE PROTEIN 384 1097 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g268 Vvi11g260 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g268 - - vvi:104880231 1352.42