Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g28 ATGAACGAAACGTTGGAGTCCCGTTCGCCGCGGGACTCCGACGGGCACGGTACCCACACTGCGTCGATCGCCGCCGGGAGGTACGTGTTTCCGGCCTCCACTCTCGGCTACGCTCGTGGCGTCGCGGCGGGGATGGCTCCCAAAGCCCGCCTCGCCGCTTACAAGGTTTGCTGGAATGCTGGCTGCTACGACTCCGACATTCTCGCTGCGTTCGACGCCGCCGTCGCCGACGGAGCCGACGTCGTGTCCCTCAGCGTTGGTGGCGTCGTAGTCCCCTACTACCTCGATTCTATCGCCATCGGCGCCTTCGGAGCTTCCGACCACGGAGTGTTCGTTTCCGCCTCCGCCGGCAATGGAGGCCCCGGCGGCCTCACCGTCACTAATGTCGCACCCTGGGTCACAACCGTCGGCGCCGGAACAATGGATCGTGATTTCCCCGCCAACGTAAAGCTCGGAAACGGAAAGTTGATTCCGGGCGTAAGCGTCTATGGCGGACCTGGGTTGGCCCCTGGGCGGCTCTATCCTCTGATATACGCTGGAAGTGTAGGTGGCGATGGATACTCATCATCACTCTGCTTGGAAGGATCCTTAGATCCCAGTTTCGTAAAAGGAAAAATCGTATTATGTGACAGAGGAATCAATTCAAGAGCTACCAAAGGTGAAGTTGTGAGAAAAGCTGGTGGAATTGGAATGATACTCGCTAATGGTGTGTTCGACGGCGAAGGCCTGGTGGCTGACTGCCATTACATCACAGTGGCTTCCAAATCCAAGTCACCGCCCACCGCCACCATAATTTTTCGGGGAACCAGGCTAGGGGTCCGTCCAGCCCCTGTCGTGGCCTCATTCTCCGCCCGTGGCCCCAATCCAGAGTCACCGGAGATACTCAAGCCCGATGTCATTGCTCCAGGGCTGAACATCCTCGCAGCCTGGCCCGACCGAGTTGGCCCATCTGGGATTCCGTCTGACAAGCGCAGAACAGAGTTTAACATACTCTCTGGTACATCAATGGCGTGCCCACATATATCTGGTCTAGCTGCATTGCTGAAGGCTGCCCACCCAGAATGGAGCCCGGCAGCAATTCGATCAGCCTTGATGACAACCGCATACACAGAAGATAACCGGGGCGAGACAATGTTGGATGAAGCCACAGGGAATACCTCAACTGTAATGGATTTTGGAGCAGGCCATGTTCATCCTCAAAAGGCCATGGACCCTGGCCTAATCTATGACTTAACCTCCAATGATTACATCGACTTCCTCTGTAACTCAAATTACACTGTCACCAACATTCAGATGATCACCAGGAAGATGGCGGATTGCAGCAAGGCAAGGAAGGCCGGCCATGTTGGGAACTTGAATTATCCATCCATGTCTGCTGTTTTCCAGCAATATGGAAAGCACAAGTTCTCGACTCATTTCATACGAACCGTGACCAATGTTGGGGACCCCAATTCAGTATACCAAGTGACAGTGAAGCCCCCCACTGGAACACTGGTGACTGTACAGCCGGAAAAGCTTGTGTTCAGGAGGTTGGGGCAGAAGCTGAACTTCCTGGTGAGGGTGGAAGCCATGGCAGTTAAGCTCTCACCAGGAAGCACTAGTATAAAGAGTGGCTCTATAGTATGGGCAGATGGGAAGCACACTGTCACTAGTCCCATAGTTGTGACACTGGAGCAACCTCTGAAAATGGGGGAATCTTTTAACATTTTTTTCTTATTTCTTCTTCAATTTTTTTTTTTCTTTTGCTTCACCTATTTTATGGCAACCAAATATACATATGAAGAGAAATATAGTTTCCTTATATATTTTCTTTCCTTTCTCAACCTATTCCCAACAATGACACCCAATCTTAATAAATAG 1860 52.26 MNETLESRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGVAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVADGADVVSLSVGGVVVPYYLDSIAIGAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPANVKLGNGKLIPGVSVYGGPGLAPGRLYPLIYAGSVGGDGYSSSLCLEGSLDPSFVKGKIVLCDRGINSRATKGEVVRKAGGIGMILANGVFDGEGLVADCHYITVASKSKSPPTATIIFRGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGIPSDKRRTEFNILSGTSMACPHISGLAALLKAAHPEWSPAAIRSALMTTAYTEDNRGETMLDEATGNTSTVMDFGAGHVHPQKAMDPGLIYDLTSNDYIDFLCNSNYTVTNIQMITRKMADCSKARKAGHVGNLNYPSMSAVFQQYGKHKFSTHFIRTVTNVGDPNSVYQVTVKPPTGTLVTVQPEKLVFRRLGQKLNFLVRVEAMAVKLSPGSTSIKSGSIVWADGKHTVTSPIVVTLEQPLKMGESFNIFFLFLLQFFFFFCFTYFMATKYTYEEKYSFLIYFLSFLNLFPTMTPNLNK* 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 343614 354566 + Vvi9g28 Vvi9g28 791739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g28 619 Pfam Fibronectin type-III domain 451 555 IPR041469 -
Vvi9g28 619 SUPERFAMILY PA domain 201 241 IPR046450 -
Vvi9g28 619 ProSitePatterns Serine proteases, subtilase family, serine active site. 333 343 IPR023828 -
Vvi9g28 619 SUPERFAMILY Subtilisin-like 8 407 IPR036852 GO:0004252|GO:0006508
Vvi9g28 619 Pfam Subtilase family 4 384 IPR000209 GO:0006508|GO:0008236
Vvi9g28 619 Pfam PA domain 189 238 IPR003137 -
Vvi9g28 619 Gene3D - 420 557 - -
Vvi9g28 619 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 5 561 - -
Vvi9g28 619 Gene3D Peptidase S8/S53 domain 6 416 IPR036852 GO:0004252|GO:0006508
Vvi9g28 619 ProSiteProfiles Serine proteases, subtilase domain profile. 1 403 - -
Vvi9g28 619 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 5 561 - -
Vvi9g28 619 PRINTS Subtilisin serine protease family (S8) signature 12 25 IPR015500 -
Vvi9g28 619 PRINTS Subtilisin serine protease family (S8) signature 332 348 IPR015500 -
Vvi9g28 619 CDD PA_subtilisin_like 148 250 - -
Vvi9g28 619 Gene3D - 142 272 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g28 - - vvi:100852502 1102.43