Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g289 ATGGCACACCCCTTTGAAGCTCACCACATCCTCAACCTCTGCGCTCCCTGTGATTCCATCCGTCCGCCCAACGTATCCGGCAAAAGGCCAGCAAGTTCATTTAGCCAGAATGGGAATTCCAACTCCAGAAATGGCGAAGCTCCCATCCCAGTGTGCCCCAATTCCTCCCTCGCCGCCGGTGGTTCCGGAGTACCAACCTGTGTGGGGAAAGATAACAAAAAGGTGTCTTGGGGACGAAGCTCGGACGTGGGAAAACGGTCGGGAATGGAGGATAGTTTAGCCATTGTCCCTGGGTTTATGTCACTGTCTTGCAAGCAGGTCGGTGGATGCACCGCGCCGGAGTGCACTTACGCCGCTGAGGACTCGCCAGTGCACTTCTTTGGCCTCTACGATGGCCATGGAGGCCCTCAGGTGAGTTGCTATTGTGCAAGGATGCTTCATGAAATGGTTGCAGAAGAGTGGGAAAGAGGAGGTGGTGATGAATGGAGTAAATGGTGGGAGGTTGCATTACGTAGGGCCTATGGGAGGGCAGATGATGCTTTAAAAGACAGGGCATTAGCGCCATACTCAGTGGGATCAACCAGTTTGGTGGTGGTTGTGTCACCCTGTCAGATCATTGCTGCCAACTGTGGAGATTCTAGGGCTGTGCTTTGCCGTGGGACTCAAGCAATTCCCTTAACTGTTGACCACAAGCTTGATCGACAAGATGAACTGGCGCGAATTGAGGAAGCAGGCGGCCAAATTCTATATTGGCAGGGTCCAAGGGTAGAAGGAGTTCTTTCTATGACAAGAGCAATAGGTGACCACTATCTGAAACCATGGATTATTTCAGAGCCTGAAGTTACTTTCACAACAAGGAGTGATGAGGATGAATGTCTGATTTTGGCAAGTGATGGCTTATGGGATGTCCTGTCTAATGAACAGGTGGTAAAGGTTGCTCGCAATTCACTGAGGGAGGAGCGCAGGAAGGCTCTGCTTAATGATAGTTCACTACCCCCAGCCCACTCTGCTGCAGATAGTCTCCTTTGCTGTGCACTTGCTGAGTACAGTGATGACAACATTTCAATTATTGTTGTCGACCTGAAATCACGAAAGAGAAGGCACCAATATAGGCACTGA 1119 50.67 MAHPFEAHHILNLCAPCDSIRPPNVSGKRPASSFSQNGNSNSRNGEAPIPVCPNSSLAAGGSGVPTCVGKDNKKVSWGRSSDVGKRSGMEDSLAIVPGFMSLSCKQVGGCTAPECTYAAEDSPVHFFGLYDGHGGPQVSCYCARMLHEMVAEEWERGGGDEWSKWWEVALRRAYGRADDALKDRALAPYSVGSTSLVVVVSPCQIIAANCGDSRAVLCRGTQAIPLTVDHKLDRQDELARIEEAGGQILYWQGPRVEGVLSMTRAIGDHYLKPWIISEPEVTFTTRSDEDECLILASDGLWDVLSNEQVVKVARNSLREERRKALLNDSSLPPAHSAADSLLCCALAEYSDDNISIIVVDLKSRKRRHQYRH* 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3253670 3276089 - Vvi9g289 Vvi9g289 792000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g289 372 MobiDBLite consensus disorder prediction 26 47 - -
Vvi9g289 372 SUPERFAMILY PP2C-like 72 363 IPR036457 -
Vvi9g289 372 Pfam Protein phosphatase 2C 112 345 IPR001932 -
Vvi9g289 372 CDD PP2Cc 78 361 IPR001932 -
Vvi9g289 372 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Vvi9g289 372 MobiDBLite consensus disorder prediction 25 47 - -
Vvi9g289 372 Gene3D - 65 370 IPR036457 -
Vvi9g289 372 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 48 372 - -
Vvi9g289 372 ProSiteProfiles PPM-type phosphatase domain profile. 76 361 IPR001932 -
Vvi9g289 372 PANTHER ALPHABET, ISOFORM E-RELATED 48 372 - -
Vvi9g289 372 SMART PP2C_4 65 359 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g289 Vvi11g276 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g289 K14497 - vvi:100258395 749.199