Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g326 | ATGGCTTACAACAAGTTGACATCAGACGCTGCTCTTGACCCGGCGGGGCTGGTGGCGGTTGCTGTTGCCCATGGTTTCGCTCTCTTTGTTGCAGTCGCTATTAGCGCCAACATCTCCGGTGGCCATGTTAACCCTGCGGTGACCTTCGGGCTGGTTGTTGGTGGTCAGATCACCATTCTCACTGGCATCTTGTACTGGATTGCCCAGCTTGTTGGCTCCATTCTTGCATGTTTCCTACTCAAACTTGTCACAGGAGGCTTGACGACTCCCGTCCATAGTCTTGGAGCTGGGGTTGGAGTCATTGATGCTATTGTCTTCGAGATCGTGATCACTTTCGCTCTGGTCTACACCGTCTATGCAACGGCGGTTGACCCGAAGAAGGGCTCACTGGGCATCATTGCACCCATTGCCATAGGTCTTGTTGTAGGTGCAAACATCCTGGCTGCAGGCCCATTCTCCGGATCTGTCTATGCAATTATGTACATGGGCTCTGATCATCAACCACTAGCGTCCAGCGAATTCTAA | 525 | 52.38 | MAYNKLTSDAALDPAGLVAVAVAHGFALFVAVAISANISGGHVNPAVTFGLVVGGQITILTGILYWIAQLVGSILACFLLKLVTGGLTTPVHSLGAGVGVIDAIVFEIVITFALVYTVYATAVDPKKGSLGIIAPIAIGLVVGANILAAGPFSGSVYAIMYMGSDHQPLASSEF* | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3713109 | 3714187 | - | Vvi9g326 | Vvi9g326 | 792037 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g326 | 174 | ProSitePatterns | MIP family signature. | 42 | 50 | IPR022357 | - | |
Vvi9g326 | 174 | PRINTS | Major intrinsic protein family signature | 24 | 48 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi9g326 | 174 | PRINTS | Major intrinsic protein family signature | 61 | 80 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi9g326 | 174 | PRINTS | Major intrinsic protein family signature | 106 | 124 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi9g326 | 174 | PRINTS | Major intrinsic protein family signature | 139 | 161 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi9g326 | 174 | Gene3D | Glycerol uptake facilitator protein. | 1 | 158 | IPR023271 | - | |
Vvi9g326 | 174 | Pfam | Major intrinsic protein | 2 | 155 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi9g326 | 174 | PANTHER | AQUAPORIN-8 | 1 | 156 | IPR034294 | - | |
Vvi9g326 | 174 | PANTHER | MIP PROTEIN | 1 | 156 | - | - | |
Vvi9g326 | 174 | SUPERFAMILY | Aquaporin-like | 10 | 155 | IPR023271 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g326 | K09873 | - | vvi:100233028 | 316.62 |