Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g362 ATGATAATTCAAATGTTTGGAGTGTTTGAAACACACACATTGAGGAAACTCAGCTTTCTGGTGTTTCTACTCTGCATTTTGATCTCTCTCAAGAACCACAATGCGGAAACTAAGAACAGTTTGCAAACTGCTAGATTGCCTCCACCTGATTCCTCTTCGATTTTCTCTCGACGGTTGTCTCTTTCTGCCAACTTCGGTGATTCTAGATCGCTAGAATATGATTTCTACCGCAACTCATGCCCACCAGCAGAGCAAATCATTCGGACAATGATTCGGCGGTTGTACGAAGTCCGGCCCAATGTCGCTCCTGCACTCTTGCGACTTGTTTTCCATGATTGCTTTATTGAGGGATGTGATGCATCGGTATTGTTGGATGCGGTTAATGGAGTCCGTTCAGAGAAAGATTCTCCCCCTAATGAAACTCTAAAGGGCTTTGATATAATTGACTCCATCAAGGCAGAGCTGGAAGCAGCATGCCCTGGAATTGTTTCCTGTGCTGATATTCTTGTATTGGCTGCCAGAGAAGTTGTTGTTCTGGCTGGTGGCCCATTCTACCCTCTGGATACCGGCAGGAGAGATAGCAGTCGGGCTTTTGCAGATGCAGCAACATATGGGATCCCTTCGCCTGATGAAGAGCTACGAACAACTCTTGCATCTTTTGCATCAAGGGGATTCAATGAGAAGGAGACTGTCAGTCTCTTAGGTGCTCACAGTATTGGAGTGGTTCACTGCAAATTCTTCCTAGACCGTCTTTACAACTTCCATGGGACCAACAGGCCTGACCCATCTTTAGATTCTGGTTTCCTTGAGCTCATGAGATCAAGATGCAATAACAGCCATAGAACAGCACCACCAGAATCACCAATTTCCTTCAATATTCAACCGCCATTTTCCTTTGATGGCTTACCATTACCTTCCTTTAATAGCTCACTACCTTCCTCCCCTGAGGAGCCAGGGATGATAATGGACTATGATGGACTGAGATCAAATTTTGGGACACTATATTACCGCAGTCTTTTGCAAGGAAGAGGAATCCTCTATGCTGATCAACAGCTAATGGCTAAGGAGGGAACTGAAAGCTGGGTAAGAGCATATGCTTCAGAAAACACCTTGTTCCGCCGGGACTTTGCCATAACAATGATGAAGCTCTCAAACCTCCAAGTATTGATTGCACCGTTGGGTCTTGTTCGGCTCAATTGTTCAAAGGTGGGCTGA 1215 45.43 MIIQMFGVFETHTLRKLSFLVFLLCILISLKNHNAETKNSLQTARLPPPDSSSIFSRRLSLSANFGDSRSLEYDFYRNSCPPAEQIIRTMIRRLYEVRPNVAPALLRLVFHDCFIEGCDASVLLDAVNGVRSEKDSPPNETLKGFDIIDSIKAELEAACPGIVSCADILVLAAREVVVLAGGPFYPLDTGRRDSSRAFADAATYGIPSPDEELRTTLASFASRGFNEKETVSLLGAHSIGVVHCKFFLDRLYNFHGTNRPDPSLDSGFLELMRSRCNNSHRTAPPESPISFNIQPPFSFDGLPLPSFNSSLPSSPEEPGMIMDYDGLRSNFGTLYYRSLLQGRGILYADQQLMAKEGTESWVRAYASENTLFRRDFAITMMKLSNLQVLIAPLGLVRLNCSKVG* 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4061964 4064269 - Vvi9g362 Vvi9g362 792073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g362 404 Gene3D - 75 206 - -
Vvi9g362 404 PRINTS Plant peroxidase signature 104 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Plant peroxidase signature 378 391 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Plant peroxidase signature 228 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Plant peroxidase signature 143 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Plant peroxidase signature 162 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Plant peroxidase signature 80 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 Gene3D Peroxidase, domain 2 207 299 - -
Vvi9g362 404 SUPERFAMILY Heme-dependent peroxidases 71 403 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 ProSitePatterns Peroxidases active site signature. 102 113 IPR019794 GO:0004601
Vvi9g362 404 PANTHER PEROXIDASE 25-RELATED 65 402 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PANTHER PEROXIDASE 65 402 - -
Vvi9g362 404 Gene3D - 384 403 - -
Vvi9g362 404 PRINTS Haem peroxidase superfamily signature 163 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Haem peroxidase superfamily signature 181 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 PRINTS Haem peroxidase superfamily signature 102 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 ProSitePatterns Peroxidases proximal heme-ligand signature. 229 239 IPR019793 -
Vvi9g362 404 Gene3D Peroxidase, domain 2 327 383 - -
Vvi9g362 404 ProSiteProfiles Plant heme peroxidase family profile. 70 404 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi9g362 404 CDD secretory_peroxidase 71 403 IPR033905 GO:0004601|GO:0042744
Vvi9g362 404 Pfam Peroxidase 88 367 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g362 K00430 - vvi:100254998 784.252