Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g366 ATGGATTTCTGGCCAGAGTTTCTTGCAAGCAGTTGGGGGAGGGAGTTTGTGGCAGGAGGGTTGGGTGGCATGGCGGGCGTGGTGTCTGGATACCCACTTGATAGCTTGAGGATCATGCAGCAGCACTCGAGGAGTGGCTCCGCCATGACCATTCTCCGGAGAGTGATAGCCACCGAGGGCCCTGGTGCTCTCTACAGAGGCATGGGCGCACCTCTCGCTTCTGTCACCTTTCAGAATGCTATGGTTTTCCAAATCTATGCCGATCTCTCAAGAGCATGTGACCCATTGGTTGCTGCCAAAGACCCTCCTTCCTACAAAGGTGTTGCTCTAGGAGGAGTTGGAACTGGGGCCATACAGAGCCTAATGCTCGCTCCTGTTGAGCTAGTTAAAATAAGACTCCAACTACAGAGAAAAAGCTATGGAGAGACCCAACCAACAAACTGTTATAAGGGTCCAGTGAGTGTCGTCAAAAGCATATGTAGAACAGAGGGTATCCGGGGACTGTACCGAGGTTTAACCATCACAGTACTCAGAGACGCGCCCTCTCATGGAGTCTATTTCTCGACCTATGAGTACATGAGAGAGCAGCTTCACCCAGGCTGCCGAAAGACTGGACAAGAAAGCTTGAGGACAATGCTAGTAGCAGGAGGGCTAGCAGGAGTCGCGAGCTGGGTTTGTTGCTACCCTTTAGATGTTGTAAAAACCCGATTACAGGCTCAATCATCATCTTCCCCACAAAAATACAGTGGCATTGTTGACTGTTTTGTGAAGAGTGTAAAAGAGGAAGGACAGGGTGTACTCTGGAGAGGATTAGGAACAGCTGTAAGTAGAGCATTTGTGGTCAATGGGGCCATTTTTGCTGCCTATGAATTTGCTCTTAGGTACTTATGTAACAACAATGGCACTCCCCTAATTTCCTTGATCACAACCGGATCAATTAGCCTTGAGGTGCACTTGGAAATTGATTCCAATATCAAAATTCTCAATCGTGAAATGTTGTTCATACTTATATAA 1014 48.03 MDFWPEFLASSWGREFVAGGLGGMAGVVSGYPLDSLRIMQQHSRSGSAMTILRRVIATEGPGALYRGMGAPLASVTFQNAMVFQIYADLSRACDPLVAAKDPPSYKGVALGGVGTGAIQSLMLAPVELVKIRLQLQRKSYGETQPTNCYKGPVSVVKSICRTEGIRGLYRGLTITVLRDAPSHGVYFSTYEYMREQLHPGCRKTGQESLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSSSSPQKYSGIVDCFVKSVKEEGQGVLWRGLGTAVSRAFVVNGAIFAAYEFALRYLCNNNGTPLISLITTGSISLEVHLEIDSNIKILNREMLFILI* 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4089905 4093765 - Vvi9g366 Vvi9g366 792077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g366 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Vvi9g366 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 295 IPR018108 -
Vvi9g366 337 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Vvi9g366 337 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Vvi9g366 337 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Vvi9g366 337 PRINTS Mitochondrial carrier protein signature 169 187 IPR002067 GO:0055085
Vvi9g366 337 PRINTS Mitochondrial carrier protein signature 216 238 IPR002067 GO:0055085
Vvi9g366 337 Gene3D Mitochondrial carrier domain 12 302 IPR023395 -
Vvi9g366 337 SUPERFAMILY Mitochondrial carrier 12 291 IPR023395 -
Vvi9g366 337 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Vvi9g366 337 Pfam Mitochondrial carrier protein 11 90 IPR018108 -
Vvi9g366 337 Pfam Mitochondrial carrier protein 110 197 IPR018108 -
Vvi9g366 337 Pfam Mitochondrial carrier protein 211 299 IPR018108 -
Vvi9g366 337 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Vvi9g366 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 196 IPR018108 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g366 K15109 - vvi:100265259 604.749