Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g386 ATGGACTTGGACAATCCTGGACCATGTGATTCCTCAGTACTTACAGAGCAAGATTTACATGTCTCCTCTGCCATTTGGGATGGAGAGGACCGTGGAGTGTTAAAATGTCATGAGCACACCAAGGAACTTAAAATGTGGAAGTTAACGGAAGCCCAAATCAAGTTAGTAGAGATGGCAGGATTTAAGCACTTGAGTATGATTACAGATATGTCTATAGATGCACCCCTCATATCAGCCCTTGTAGAGAGGTGGAGAAGAGAAACAAACAGTTTTCATATGAGGGTGGGGGAGATGACTATTACCCTTGAAGATGTTTTCTTGATACTTGGATTACCAATTGATGGTGATCCAGTTATAGGGGTTACATCTCATGCATGCGAGTCAATATGCAGGAAGTTGTTGGGAAATGTCCCAAGATCCGAGCACAGAAGTGGCAGAATGGTAAAGCTAAGCTGGTTAAGGGAGAGCTTCTCAAGGTGTCCTGAAGATGCATCTGAGGAACAGATTAAGCGATCCACCCGTGCTTACCTTCTATATCTTCTAGGTTGCACTATATTTTCCTCCAGCACAGGTAATAAGGTACCAGTAATGTACCTTCAATTCTTTGAGAATTTTGATGATACCAAAAGATATGCTTGGGGCGCAGCAGCATTGGCATACTTATATAGAGCCCTTGGAAATGCCTCACTTAATGGGCAAACCAGTATTTGTGGGAGTATTACACTACTTCAGTGTTGGAGTTATGAGCATCTAAAAGTTGGTCGACCAGCTCTTGAGAACTTTCATAAGTCTGCTCAAGACTTTCCTCGAGCTCTAAAATGGAGAAGGAAGCGAAAAGTTTATTCAAATAGCAAAAGTTTGTCTGTTTACCGTGAGGCACTGGACACTCTAGAATTGTCTGACGTTACCTTTCTTCCATATATAGATATGGATAATGCTCTTATACAGGAAGAAATGAGGAAACAGATGACTATAGGAAGGAGTTCCACCATGCTGATTTGTTTTGATAAAGCTGAACGACACCTCCCAGACCGTTGCTTGCGTCAATTTGGCATGCATCGATCACCGCCTACACCAGTCAAGCAGTGGAAAAGGAAATCACGTGATACTTATGAGAGTACAGATTTGTCTAAGAAGATGGCATCTGAGTTAAGGGAATGGAAGGGGCGTCGGAATCATATTATTAAGGATGATTTGGATGGAGATGAAAGCAGATATATGGACTGGTACTTAAATATAACTCGTAAACTCATAGGAAGGCCTTCTCCTCAACCCAACCCTGCAACTCAACAAGCACCACCTCCCTTATGCAATCCAACATCTCAAAAGTTGTCTCCTCCATCCACGACTACAACTCAACAAAGATCATCTCCTCTATCCAGCTCAACAATGCAAATACTGCCTTCTCCTATTCCCACTCTTACAACTCAACGCAGGCCATCTCCTGTAGTCTGCTCAACATCTGAACAGATGCTATCTCCTCTGCCCACCGCTGCAACCCAAACACTCTCAACTACACAACAAATAGCATCTCCTCTACCAACCTTAGCAACTCAACAAGGGTCATCTCCTCTACCCAGCACAGCTACTGAACGAAGTTTTAATCCTAATGAATTGGAGTCAACTAAAATTTCATCTCTTCTCTCATCTGAGAATGCTAGAATGTCTGCTGCATTGCGGGAAATAGCTCACATTACAAATGACCTTTCCACTGAAGGCTTTGATTCCCAACAATTGCAATCACTTTTAAAGATCAAGGAATTGCTTCATGTGGGTTATGGTGATGAGACAGAAGTGGGTGTGGAAGTAGATCCTAGGAACAAAGAAGTGGTTAATGATGATGGGGATCCAGATCAGACTTTGTTGTCACAATTGCATTATTTGGCTACTGCTTGTGCAGAATCTTCACAAAATCCTGAACCCACTTTGGACGAAGACCCCTCACACATGCTTGCATCAACTGAAAATTTGTCTCAACCACCTGTTCAAATTCCTCTCACCTGGCCTGTCAATGGCATTTTAACCCTGGATTGGATGCATGACGTTATGTCTGCCTTTGAGTGGTCTTCATGGAATATCTCTCCCTCAGAATTCACTTCCATCTTGCCATCTTCTGTCTTTGATAGCCTCCTTAACTCTGCATCAAGGATTCTGCATAAGGAGCCAAATTGTGTGAGGATAGATTGTTTTGAGGAGGATTTAAGTGTGGTTATCGTTGGTGATATTTGTGGGAAACTGCATGATCTCATTTTCCTTCTGCAAGATGCTGGTTTTCCTTCACAAAACCGAATCTTTGTTTTCAATGGAGATTATATTGGTATTGGAGGGTGGGGTCTTGAGACATTTTTACTTCTATTGGCTTGGAAGGTCCTTCTGCCACATAGAGTATATTTACTTCGTGGAAATCATGAAACCAAGCTTTGCACATCTGAGTGTGGGTTTGAGGAGGAGGTGATGACGAAATATGGAGATCAAGGGAAGCATGTCTACCGTAGATGCTTAGACTGCTTTTCAAAACTTCCTTTGGCCTCAACAATAGCAGGGCGTGTTTATACAACTCATGGAGGTCTTTTTCGAAGCAGCAATTCAGAAGAGTCCAATCATGATGTTGAGATGCTGTCTCTGGGTTCTTTGGAAGAATTATCCAAAGCAAAGAGAACAATTCTAGATCCTCGAAGTTCAGGAACAAACTCAATACTTTGTGATGCATTGTGGTCAGATCCTTCAATGGAGTGTGGCCTTAAACCAAATTTACAGAGAGGCTGTGGCCTACTGTGGGGTCCTGATTGCACTGAGACCTTCTTAAAGAAGTCAAATTTAAAGTTGATTATCAGATCGCATGAAGGCCCTGATGCAAGGGAGAAACGAGAAGATCTTGGTAGAATGGATGAAGGGTATTCCATAGATCATGAAGTAGAATCAGGGAAACTAGTCACTCTATTCAGTGCTCCAGACTTTCCGCCGTCTCAGAGCTCAGGGGAAAGACTTAACAATAAAGGGGCATACATTGTTCTAGGGCCTCCTACTTTCGATGATCCAGTTTTCCACACCTTCAAAGCTGTGACTCTAGGAGCCAAGCTGCAGATTAGAAAAAATGAAGATAGTCAGGCAAATGAGAGGAAGAAACATAGAAAATCTGAAGTGTGTCGAAAGAGAGAACAGGAAACAGAGAAGAGTGTTAAACGACATCTCTGGGCACCAGCACAGTTTTGA 3213 42.55 MDLDNPGPCDSSVLTEQDLHVSSAIWDGEDRGVLKCHEHTKELKMWKLTEAQIKLVEMAGFKHLSMITDMSIDAPLISALVERWRRETNSFHMRVGEMTITLEDVFLILGLPIDGDPVIGVTSHACESICRKLLGNVPRSEHRSGRMVKLSWLRESFSRCPEDASEEQIKRSTRAYLLYLLGCTIFSSSTGNKVPVMYLQFFENFDDTKRYAWGAAALAYLYRALGNASLNGQTSICGSITLLQCWSYEHLKVGRPALENFHKSAQDFPRALKWRRKRKVYSNSKSLSVYREALDTLELSDVTFLPYIDMDNALIQEEMRKQMTIGRSSTMLICFDKAERHLPDRCLRQFGMHRSPPTPVKQWKRKSRDTYESTDLSKKMASELREWKGRRNHIIKDDLDGDESRYMDWYLNITRKLIGRPSPQPNPATQQAPPPLCNPTSQKLSPPSTTTTQQRSSPLSSSTMQILPSPIPTLTTQRRPSPVVCSTSEQMLSPLPTAATQTLSTTQQIASPLPTLATQQGSSPLPSTATERSFNPNELESTKISSLLSSENARMSAALREIAHITNDLSTEGFDSQQLQSLLKIKELLHVGYGDETEVGVEVDPRNKEVVNDDGDPDQTLLSQLHYLATACAESSQNPEPTLDEDPSHMLASTENLSQPPVQIPLTWPVNGILTLDWMHDVMSAFEWSSWNISPSEFTSILPSSVFDSLLNSASRILHKEPNCVRIDCFEEDLSVVIVGDICGKLHDLIFLLQDAGFPSQNRIFVFNGDYIGIGGWGLETFLLLLAWKVLLPHRVYLLRGNHETKLCTSECGFEEEVMTKYGDQGKHVYRRCLDCFSKLPLASTIAGRVYTTHGGLFRSSNSEESNHDVEMLSLGSLEELSKAKRTILDPRSSGTNSILCDALWSDPSMECGLKPNLQRGCGLLWGPDCTETFLKKSNLKLIIRSHEGPDAREKREDLGRMDEGYSIDHEVESGKLVTLFSAPDFPPSQSSGERLNNKGAYIVLGPPTFDDPVFHTFKAVTLGAKLQIRKNEDSQANERKKHRKSEVCRKREQETEKSVKRHLWAPAQF* 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4309090 4316929 - Vvi9g386 Vvi9g386 792097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g386 1070 MobiDBLite consensus disorder prediction 420 489 - -
Vvi9g386 1070 Pfam Calcineurin-like phosphoesterase 735 950 IPR004843 GO:0016787
Vvi9g386 1070 PANTHER PROTEIN MAIN-LIKE 2 3 631 IPR044824 GO:0010073|GO:0048507
Vvi9g386 1070 Pfam Plant mobile domain 60 410 IPR019557 -
Vvi9g386 1070 PRINTS Serine/threonine phosphatase family signature 735 762 IPR006186 GO:0016787
Vvi9g386 1070 PRINTS Serine/threonine phosphatase family signature 765 792 IPR006186 GO:0016787
Vvi9g386 1070 PRINTS Serine/threonine phosphatase family signature 798 822 IPR006186 GO:0016787
Vvi9g386 1070 PRINTS Serine/threonine phosphatase family signature 835 861 IPR006186 GO:0016787
Vvi9g386 1070 PRINTS Serine/threonine phosphatase family signature 882 909 IPR006186 GO:0016787
Vvi9g386 1070 PRINTS Serine/threonine phosphatase family signature 976 992 IPR006186 GO:0016787
Vvi9g386 1070 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 3 631 - -
Vvi9g386 1070 ProSitePatterns Serine/threonine specific protein phosphatases signature. 799 804 IPR006186 GO:0016787
Vvi9g386 1070 MobiDBLite consensus disorder prediction 362 378 - -
Vvi9g386 1070 MobiDBLite consensus disorder prediction 435 489 - -
Vvi9g386 1070 SMART pp2a_7 702 1022 IPR006186 GO:0016787
Vvi9g386 1070 Gene3D - 693 1066 IPR029052 -
Vvi9g386 1070 MobiDBLite consensus disorder prediction 1032 1060 - -
Vvi9g386 1070 MobiDBLite consensus disorder prediction 349 378 - -
Vvi9g386 1070 SUPERFAMILY Metallo-dependent phosphatases 677 1026 IPR029052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g386 - K04460 vri:117921558 1964.89