Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g387 ATGCCACCAGTGGAGATACACAGAGTTTGCTTACCACCAAGCAAAACCACCTTTCAGAAACTCAGACAGAGGCTCTCTGAGATTTTCTTCCCAGATGACCCTCTCCACAGGTTCAAGAACCAGTCTTCCTTTACAAAACTGGTTCTGGCCCTCCAGTTCTTCTTTCCCATCTTCCACTGGGCACCCACTTACAGTTTAGCTCTTTTGAGGTCTGATATCATCTCTGGTCTCACCATTGCAAGCCTTGCAATCCCACAAGGAATTAGTTATGCAAAGCTTGCAAATTTGCCGCCCATTATTGGACTATATTCAAGCTTTGTGCCCCCATTGATATATTCTATTCTTGGGAGCTCTAGGCATCTTGCTGTCGGTCCAGTCTCGATAGCATCACTGGTCATGGGCACGATGCTAAATAACGCGGTTTCTTGCAGTGCAGATCCAATTCTGTATCTCAAATTGGCTTTCACTGCAACCTTCTTCGCTGGTTTGTTTCAGGCTGCTTTGGGTCTACTGAGGTTGGGGTTTATAATTGATTTCCTCTCAAAGGCAACTCTAGTTGGGTTCATGGCTGGTGCAGCAGTCATAGTATCTCTGCAACAACTGAAAGGGTTGCTCGGGATCGCCCATTTCACTACCAAGATGCAAATTGTCCCTGTTTTAACTTCTGTTTTCCAGCAGAGACATGAGTGGTCCTGGCAAACCATCGTAATGGGATTCGGCTTCCTAGCCTTTCTATTGATTACAAGGCAAATTAGCATGAGAAGGCCAAAACTTTTCTGGGTTTCAGCAGCTGCCCCACTGACATCAGTTATTCTCTCAACCCTTCTAGTCTTTCTCCTCAAGTCGAAACTTCATGGGATCTCAATTATTGGTCACTTACCAAAGGGTCTGAATCCACCTTCATCAAATATGCTATACTTCCATGGCTCTTATCTTGCAGTTGCTATCAAAACTGGCATTATAACTGGAATCCTATCTCTCACTGAAGGAATAGCAGTGGGAAGGACATTTGCTGCTCTGAGAAATTACCAAGTTGATGGCAACAAAGAAATGATGGCCATTGGTTTCATGAACATGGCTGGTTCTTGTTCTTCATGCTATGTAACCACAGGATCATTTTCCCGATCTGCTGTGAACTACAATGCTGGAGCACAAACAGCAGTCTCAAACATAATAATGGCATCAACGGTGCTTGTGACTCTGTTGTTTCTCATGCCACTGTTTCACTACACTCCCAATTTCATATTGGCTGCCATTATCATAACCGCTGTGATTGGGCTTATTGATTATGAGGCTGCATATAAATTGTGGAAAGTCGACAAGCTTGATTGCTTTGCTTGTTTGTGTTCCTTCTTTGGTGTGCTCTTCATTTCAGTTCCCCTGGGTCTTGCTATTGCGGTTGGAGTATCAGTATTCAAGGTTCTCTTGCATGTCACGAGGCCAAACACTATGGTATTAGGGAATATCCCAGGAACTCAAATATATCAAAATCCCAGCCGATACAGAGAAGCAATGAAGGTTCCTTCATTTCTTATACTTGCTGTGGAGTCTCCCATCTACTTTGCAAATTCCACTTACATACAAGAAAGGATACTAAGATGGGTCCGTGAGGAAGAAGAGCAGATACAAGCAAACAATGGGAATGCGCTGAAATGTGTAATTTTAGACATGACAGCTGTGACAGCAATAGACACAAGTGGTATTGACGTGATATGTGAACTCCGAAAGATGCTGGAGAAAAGATCACTTCAGTTTGTGTTGGCAAATCCCGCTGGAAATGTGATGGAAAAGCTACATCAGTCAAAAATATTGGATTCCTTTGGGTTGAATGGACTCTACCTGGCAGTTGGAGAAGCCGTGGCCGACATCTCCTCACTGTGGAAGGCTCAACCATGA 1896 43.88 MPPVEIHRVCLPPSKTTFQKLRQRLSEIFFPDDPLHRFKNQSSFTKLVLALQFFFPIFHWAPTYSLALLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGTMLNNAVSCSADPILYLKLAFTATFFAGLFQAALGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIAHFTTKMQIVPVLTSVFQQRHEWSWQTIVMGFGFLAFLLITRQISMRRPKLFWVSAAAPLTSVILSTLLVFLLKSKLHGISIIGHLPKGLNPPSSNMLYFHGSYLAVAIKTGIITGILSLTEGIAVGRTFAALRNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASTVLVTLLFLMPLFHYTPNFILAAIIITAVIGLIDYEAAYKLWKVDKLDCFACLCSFFGVLFISVPLGLAIAVGVSVFKVLLHVTRPNTMVLGNIPGTQIYQNPSRYREAMKVPSFLILAVESPIYFANSTYIQERILRWVREEEEQIQANNGNALKCVILDMTAVTAIDTSGIDVICELRKMLEKRSLQFVLANPAGNVMEKLHQSKILDSFGLNGLYLAVGEAVADISSLWKAQP* 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4318261 4323119 - Vvi9g387 Vvi9g387 792098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g387 631 SUPERFAMILY SpoIIaa-like 505 621 IPR036513 -
Vvi9g387 631 Pfam Sulfate permease family 69 448 IPR011547 GO:0016021
Vvi9g387 631 ProSiteProfiles STAS domain profile. 500 623 IPR002645 -
Vvi9g387 631 PANTHER SULFATE TRANSPORTER 1 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi9g387 631 CDD STAS_SulP_like_sulfate_transporter 501 616 - -
Vvi9g387 631 ProSitePatterns SLC26A transporters signature. 98 119 IPR018045 GO:0008271|GO:0008272
Vvi9g387 631 Gene3D STAS domain 480 625 IPR036513 -
Vvi9g387 631 PANTHER SLC26A/SULP TRANSPORTER-RELATED 1 631 - -
Vvi9g387 631 Pfam STAS domain 501 619 IPR002645 -
Vvi9g387 631 TIGRFAM sulP: sulfate permease 56 619 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g387 Vvi11g364 ECH
Vvi9g387 Vvi11g365 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g387 K17471 - vvi:100267000 1216.06