Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g421 ATGGAGAAAGAAAATTGGGCTACTGCTAATGCTGAAGAACTGACCACTCGAGTAACACGATCTCGAGCTGCTACATACCGTGCATCTAAGCAGATGCTTCCTAAAAATGCTTCCATGCCACAAGAACAGAAGCGGACTTCACAATCAAATTTAAAAAGGCCAGCCTTGGAGGAGAAGAACAATGCAGCTTCTGCTACCACAGCTCCTCAGTGTAAGAAGAGGGCAGTGCTTAAGGATGTCGCAAATATTTGCTGTGAAAATTTGTACATGAACTGCATTGATGCTACTAAAATTCAGAAAAGGAACAGCAAGCAGGCTAGGAAAGGTTGGGTGATGTTACCCAAGGTGGCTCCTTCTGTTACTGTAGAAATATCACTTCTTTCAGCTGATCCGAAGGCAACAGTGGCTCAAGAAGTAGAAAAACAGGAAATTGAACCTGAAGTTATATGTCTGACTATAGATGGGAATTTACCTTCCCAGTTAACTTCAAGAACTACCTTAAGGAAATGTGGCATAGCTGACAATCAGGTTGAAAAACACTGTTCTGAAATTGCTTCACAACTCCACAGCTCTTCAAATGAAGCAGAAAAGGGTAGCTTTGATGGAAAGCTGACAACATCAAGCAATCCAGATGTTAAGGATATTGATTCTGATGACAAGGATCCTCAATTGTGTAGCCTCTATGCCCCTGAAATCTATAACAATTTGCATGTTGCAGAGCTCAACCGAAGGCCATGTTCTAATTTTATGGAAACAGTGCAGCGAGATATCACTCAGAGTATGCGGGGGATTCTGGTTGACTGGCTTGTAGAGGCATCTGAGGAATACAAGTTGGTGCCAGATACACTTTACCTCACTGTACATCTCATTGATTGGTTTCTCTCTCAAAACTACATTGAAAGACAAAAACTTCAACTTCTTGGCATCACCTGCATGCTAATTGCCTCGAAGTATGAAGAAATTTGTGCCCCACGAGTGGAAGAATTTTGCTGCATCACAGACAACACTTACTCAAGAGGAGAGGTGGTGAAAATGGAGAGTCAAGTACTGAACTATTTTGGCTTTAAGATTTTTGCACCAACTGCAAAAACTTTTCTCAGGAGATTCCTACGAGCGGCACAAGCATCTTACAAGAATCCTAGTCTTGAATTGGAGTATTTGGGTAATTATCTAGCAGAGCTGACACTGATTGACTATGGCTGTCTGAAATACCTTCCTTCCATCATTGCTGCATCAGCTGTATTTCTTGCAAGATGGACACTAGATCAATCAGGCCACCCTTGGAATCCCACTCTAGAACACTACACCAGGTACAAGGCATCAGATCTCAAGACTGCAGTTTTTGCATTACAAGATTTGCAACTGAACACTAGTGGCTGCCCTCTGAATGCTATACGTGGCAAATACAGGCAGAATAAGTTCAAATCTGTAGCCAGTTTGTCTTCCCCAAAACTGCTCCAAACTCTCTTCTAA 1473 42.16 MEKENWATANAEELTTRVTRSRAATYRASKQMLPKNASMPQEQKRTSQSNLKRPALEEKNNAASATTAPQCKKRAVLKDVANICCENLYMNCIDATKIQKRNSKQARKGWVMLPKVAPSVTVEISLLSADPKATVAQEVEKQEIEPEVICLTIDGNLPSQLTSRTTLRKCGIADNQVEKHCSEIASQLHSSSNEAEKGSFDGKLTTSSNPDVKDIDSDDKDPQLCSLYAPEIYNNLHVAELNRRPCSNFMETVQRDITQSMRGILVDWLVEASEEYKLVPDTLYLTVHLIDWFLSQNYIERQKLQLLGITCMLIASKYEEICAPRVEEFCCITDNTYSRGEVVKMESQVLNYFGFKIFAPTAKTFLRRFLRAAQASYKNPSLELEYLGNYLAELTLIDYGCLKYLPSIIAASAVFLARWTLDQSGHPWNPTLEHYTRYKASDLKTAVFALQDLQLNTSGCPLNAIRGKYRQNKFKSVASLSSPKLLQTLF* 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4901144 4908637 - Vvi9g421 Vvi9g421 792132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g421 490 MobiDBLite consensus disorder prediction 188 211 - -
Vvi9g421 490 SMART cyclin_7 267 351 IPR013763 -
Vvi9g421 490 SMART cyclin_7 364 452 IPR013763 -
Vvi9g421 490 SUPERFAMILY Cyclin-like 360 485 IPR036915 -
Vvi9g421 490 MobiDBLite consensus disorder prediction 1 69 - -
Vvi9g421 490 PIRSF Cyclin_A_B_D_E 14 489 IPR039361 -
Vvi9g421 490 Gene3D - 231 479 - -
Vvi9g421 490 Pfam Cyclin, N-terminal domain 231 357 IPR006671 -
Vvi9g421 490 MobiDBLite consensus disorder prediction 9 68 - -
Vvi9g421 490 Gene3D - 245 358 - -
Vvi9g421 490 CDD CYCLIN 360 450 IPR013763 -
Vvi9g421 490 MobiDBLite consensus disorder prediction 188 217 - -
Vvi9g421 490 PANTHER CYCLINS 51 490 IPR039361 -
Vvi9g421 490 PANTHER CYCLIN-A2-4 51 490 - -
Vvi9g421 490 SUPERFAMILY Cyclin-like 220 357 IPR036915 -
Vvi9g421 490 CDD CYCLIN 261 350 IPR013763 -
Vvi9g421 490 Pfam Cyclin, C-terminal domain 360 482 IPR004367 -
Vvi9g421 490 SMART Cyclin_C_2 360 483 IPR004367 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g421 K06627 - vvi:100254892 966.066