Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g460 | ATGGTGGGTGCATCGAGCTCATGGTCTCGCGCACTGGTTCAGATCTCACCCTACACCTTCTCCGCCATCGGTATCGCCATCGCCATCGGCGTTTCCGTCTTGGGTGCCGCTTGGGGAATTTATATAACTGGAAGTAGTTTAATTGGTGCTGCCATCAAAGCTCCTCGGATTACTTCAAAAAATCTGATCAGTGTCATCTTCTGTGAGGCTGTTGCTATATATGGAGTTATTGTGGCAATCATTCTTCAAACAAAGCTAGAGAGTGTGCCTGCATCCAATATTTATGCACCGGAGTCCCTTAGAGCCGGATATGCAATCTTTGCCTCTGGAATTATTGTGGGTTTTGCCAACCTTGTCTGTGGGTTGTGCGTAGGAATAATTGGAAGCAGTTGTGCTTTATCTGATGCTCAAAACTCATCACTTTTTGTTAAGATCCTTGTGATTGAGATCTTTGGCAGTGCACTTGGATTGTTTGGGGTGATTGTGGGAATAATCATGTCCGCCCAAGCAACATGGCCGGCCAGTACGGCATGA | 534 | 46.63 | MVGASSSWSRALVQISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASNIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPASTA* | 178 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5495169 | 5499348 | + | Vvi9g460 | Vvi9g460 | 792171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g460 | 177 | CDD | ATP-synt_Vo_c_ATP6F_rpt2 | 102 | 166 | - | - | |
Vvi9g460 | 177 | SUPERFAMILY | F1F0 ATP synthase subunit C | 16 | 85 | IPR035921 | - | |
Vvi9g460 | 177 | Pfam | ATP synthase subunit C | 107 | 166 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Vvi9g460 | 177 | Pfam | ATP synthase subunit C | 23 | 82 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Vvi9g460 | 177 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 36 | 60 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Vvi9g460 | 177 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 62 | 86 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Vvi9g460 | 177 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 118 | 144 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Vvi9g460 | 177 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 145 | 168 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Vvi9g460 | 177 | PANTHER | V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT | 3 | 174 | - | - | |
Vvi9g460 | 177 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 3 | 174 | - | - | |
Vvi9g460 | 177 | Gene3D | - | 18 | 173 | IPR035921 | - | |
Vvi9g460 | 177 | CDD | ATP-synt_Vo_c_ATP6F_rpt1 | 20 | 82 | - | - | |
Vvi9g460 | 177 | SUPERFAMILY | F1F0 ATP synthase subunit C | 99 | 167 | IPR035921 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g460 | K03661 | - | vvi:100253217 | 321.242 |