Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g469 ATGGAGCAAATCAAGACTCCATTCAGAGGAATAGCAGAAGATATCCGAGGAAGAGCATTATGTTATAGGCAAGACTGGACCGATGGTATTCGATCCCGCATTCGGATATTGGCTCCAACTACTTACATATTCTTTGCTTCAGCCCTTCCTGTTATAGCCTTTGGTGAGCAATTGAGTAGAGATACAGATGGAAGTTTAAGCACAGTGGAAACTTTAGCTTCTACTGCTATTTGTGGTATCATCCACTCAATTCTTGGTGGGCAACCTCTTTTGATATTAGGAGTTGCAGAACCTACTGTCATAATGTACACGTATCTGTACAACTTCGCCAAAGGAAGGGCCGAGTTGGGACAAGAACTCTTTTTGGCATGGGCTGGATGGGTTTGTGTGTGGACAGCTCTCATGCTGTTCCTTCTTGCAATATTCAATGCTTGTGATATCATCAATAGGTTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTGATTGCTGTTCTCTTCATTCAAGAGGCCATCAAGGGAGTGGTGAATGAGTTTAGGGTTCCTAAAGGGGAAGACCCAAAGGCAGAGAAGTACCAATTCCAGTGGCTCTATGTCAATGGGCTGCTCAGTATTATATTTGTTTTTGGTCTGCTCTACACTGCCTTAAAGAGCCGAAAGGCACGGTCATGGCTGTATGGCACAGGGTTGTTCAGAAGTTTCATTGCAGACTATGGGGTTCCATTGATGGTTGTAGTGTGGACAGCCCTGTCTTTCAGTGTGCCAAGCAAAGTTCCGTCTGGGGTTCCCAGGAGGCTCAATAGCCCTCTCCCTTGGGACTCTGAATCTGTATACCATTGGACTGTGATCAAGGATATGGGCAATGTCCCTCCAGCATACATCTTTGCTGCCATTATTCCTGCTTTGATGATAGCCGGGCTTTATTTCTTCGATCACAGTGTTGCTTCACAGATGGCACAGCAGAAGGAGTTCAATCTCAAGAAACCTTCTGCTTATCACCATGACATCTTGCTGTTAGGATTTATGACTCTGCTTTGTGGATTGCTTGGATTACCTCCTTCAAATGGGGTCCTGCCACAGTCCCCCATGCACACTAAGAGCCTTGCTACACTTAAAAGACAGCTGATTAGGAAGAAAATGGTGAAAAGTGCCAAGGAAAGCATAAAACAGAAAGCCGCCAATCCTGAAATCTATAGCAATATGCAAGCTGTGTTCATTAAAATGGACAATACCCAACCTACAAAATCAGTAGTTAAAGAGTTGGAAGACCTGAAAGAGGCGGTCATGAAGGGAGAAAATAAACAAGCAAACAAAGAGGAAAATGCCACAGGCACATTTGATCCAGAGCAGCATATTGACCCCTACTTGCCCGTTCGGGTTAATGAGCAGAGAGTGAGCAATCTGCTGCAGTCCCTCCTTGTGGCCGCAGCAGTATTCGCTATGCCCTTAATAAAGAAGATACCAACATCCGTTCTTGCAGGATACTTTGCCTACATGGCCATTGACAGCCTCCCAGGGAACCAATTCTGGGAGAGGTTCCTACTTGTCTTCATCACTCCTCAGCGACTCTACAAGGTGAAGGAAGGGGTCCATGCTTCATTTGTAGACATGGTACCATTCAAGTCTATAACCATGTTCACCCTCTTCCAGTTGGCATACTTCATGTTGTGTTTTGGGGTGACATGGATACCTATAGCTGGAATTCTTTTCCCCTTACCATTCTTCATTCTCATAGGCATTAGACAGTATATCCTCCCTAAATTCTTTGACTCTCATCATCTCCGGGAGCTGGATGCAGCTGAATATGAAGAAGTTGCTGTGGCCCTCACCGGACATCCTCTTGGCCTGTCTTCTAAGGAAGTGGAATCAACTCATTCCGGAAAGGCAGAAGATGGAATGGATTTGAGTGATGGGGAGATATTAGATGAACTAACGACTAGTAGAGGGGAGGTGAAGAGGAGGACTCTAAGCTTTGGGGAAGAAAAACATGCCCAAGAAAGATACTGA 2007 45.09 MEQIKTPFRGIAEDIRGRALCYRQDWTDGIRSRIRILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTVIMYTYLYNFAKGRAELGQELFLAWAGWVCVWTALMLFLLAIFNACDIINRFTRIAGELFGMLIAVLFIQEAIKGVVNEFRVPKGEDPKAEKYQFQWLYVNGLLSIIFVFGLLYTALKSRKARSWLYGTGLFRSFIADYGVPLMVVVWTALSFSVPSKVPSGVPRRLNSPLPWDSESVYHWTVIKDMGNVPPAYIFAAIIPALMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHHDILLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLATLKRQLIRKKMVKSAKESIKQKAANPEIYSNMQAVFIKMDNTQPTKSVVKELEDLKEAVMKGENKQANKEENATGTFDPEQHIDPYLPVRVNEQRVSNLLQSLLVAAAVFAMPLIKKIPTSVLAGYFAYMAIDSLPGNQFWERFLLVFITPQRLYKVKEGVHASFVDMVPFKSITMFTLFQLAYFMLCFGVTWIPIAGILFPLPFFILIGIRQYILPKFFDSHHLRELDAAEYEEVAVALTGHPLGLSSKEVESTHSGKAEDGMDLSDGEILDELTTSRGEVKRRTLSFGEEKHAQERY* 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5612906 5616659 + Vvi9g469 Vvi9g469 792180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g469 668 Coils Coil 421 441 - -
Vvi9g469 668 MobiDBLite consensus disorder prediction 623 638 - -
Vvi9g469 668 PANTHER ANION EXCHANGE PROTEIN 1 665 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi9g469 668 MobiDBLite consensus disorder prediction 618 638 - -
Vvi9g469 668 Pfam HCO3- transporter family 458 548 IPR011531 GO:0006820|GO:0016021
Vvi9g469 668 Pfam HCO3- transporter family 201 374 IPR011531 GO:0006820|GO:0016021
Vvi9g469 668 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Vvi9g469 668 PANTHER BORON TRANSPORTER 4-RELATED 1 665 - -
Vvi9g469 668 Gene3D Helical hairpin bin 18 60 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g435 Vvi9g469 ECH
Vvi9g469 Vvi11g419 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g469 K24194 - vvi:100249812 1305.81