Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g478 | ATGTATGGGTTCCCAATTAGTCATTGGAAAATAATAAGTTTAGTGTTTTGGCTTGGTTCTGTCATGAGTTGGTTGACCGCTCTTCCAGCCCCACCATTACTTATTCTGAAGCAGGACCAAAATGGACCTGGAGTTGCTGGCATTAAATCCCTAAGAGTGCTTGCACTACTTGGGGCAGGTGTTTCAGGCCTTTTGAGCTTTGCAACAATAGCTTCTTCAGATGAGGCTGAACATGGCCTGGCATGTCCAAACTATCCATGGCCTCACAGCGGCATTCTCAGTTCATATGACCATGCTTCGATTCGGCGGGGTCACCAGGTTTACCAGCAAGTTTGTGCTTCTTGCCATTCAATGTCTTTAATTTCATTTCGTGATCTTGTGGGTGTGGCATACACTGAAGAAGAGACGAAGGCTATGGCAGCTGAGATTGAAGTGGATGATGGGCCTAATGATGAAGGTGAGATGTTTACTCGCCCTGGAAAGCTAAGTGATCGTTTTCCTCAGCCTTATGCAAATGAACAAGCAGCTAGATTTGCTAATGGAGGAGCATATCCTCCAGATCTAAGTCTCATCACCAAGGCCCGCCACAATGGTCAGAATTATGTATTTGCTCTTTTAACTGGTTACCGTGATCCTCCAGCTGGTGTTTCAATTCGAGACGGGCTGCACTATAATCCTTATTTCCCTGGTGGGGCAATAGCTATGCCCAAAATGCTCATCGATGGTGCTGTTGAGTATGAAGATGGTACCCCTGCCACAGAAGCACAAATGGGGAAAGATGTTGTCACATTTTTATCATGGGCTGCAGAGCCAGAAATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTGTTGTCACTTGCACTTCTCCAAGCAGCTTACTACCGACGCCTAAAATGGTCAATCTTCAAGTCCCGTAAGCTGATTGTCGATGTTGTCAACTGA | 951 | 45.32 | MYGFPISHWKIISLVFWLGSVMSWLTALPAPPLLILKQDQNGPGVAGIKSLRVLALLGAGVSGLLSFATIASSDEAEHGLACPNYPWPHSGILSSYDHASIRRGHQVYQQVCASCHSMSLISFRDLVGVAYTEEETKAMAAEIEVDDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPKMLIDGAVEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSIFKSRKLIVDVVN* | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5759462 | 5762990 | - | Vvi9g478 | Vvi9g478 | 792189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g478 | 316 | Gene3D | - | 76 | 271 | IPR036909 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | SUPERFAMILY | Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor | 271 | 315 | IPR021157 | - | |
Vvi9g478 | 316 | Gene3D | - | 272 | 315 | - | - | |
Vvi9g478 | 316 | ProSiteProfiles | Cytochrome c family profile. | 99 | 251 | IPR009056 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PANTHER | CYTOCHROME C1 | 35 | 316 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | Pfam | Cytochrome C1 family | 87 | 303 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PANTHER | CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL | 35 | 316 | - | - | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 85 | 104 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 105 | 124 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 150 | 170 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 183 | 207 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 221 | 232 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 232 | 251 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 252 | 271 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | PRINTS | Cytochrome C1 signature | 271 | 286 | IPR002326 | GO:0009055|GO:0020037 | |
Vvi9g478 | 316 | SUPERFAMILY | Cytochrome c | 80 | 270 | IPR036909 | GO:0009055|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g478 | K00413 | - | vvi:100261810 | 569.696 |