Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g479 ATGGAGGAATACTTCTTGCAGTGGTTTTGGCCTCTCTTCTCATTCATGGCTCTAGTGTTTGTGTTGAAGGTTGTGGATTATCTTTGGTGGAGACCCAAGAGAATTGAGAAACACTTCTCCAAGCAAGGTATCAGAGGACCCCCATATCAGTTCTTCATAGGCAACATAAAGGAGATTGTGGGGCTGACCTTGAAGACTTCATCTCAGCCCATGCCTCTCTCTGATCACAACATCCTCCCCAGAGTTCTTTCCTTCTATCATCACTGGAAGAAAATCTATGGTGCAACCTTCCTGGTATGGTTTGGACCGACATCTCGCGTCACCATCTCAGATCCAGTACTCATTCGAGAAATATTTATCTCCAAAGCAGAATTCTATGAGAAAAATGAGTCACACCCTCTTGTCAGAAAGCTTGAAGGTGATGGCTTGTTGACCCTCCAAGGAGAAAAATGGGCTCACCATAGAAAGATCATCTCACCAACCTTTCACATGGAGAATGTCAAACTAATGATTCCAACCATGGGAAAAACCATGGCGGCAATGTTGGACAAGTGGTCAACAATGGCGAATTCAGACGAGGTGGAGATCGAAGTCTCAGAATGGTTTCAAAGATTGACTGAAGAAGTGGTTACCAGAACAGTCTTTGGGACCAGCTATGAAGATGGAAAATCAATTTTCCAGTTGCAAGCCCAACAAATGGTATCTGCCATAGAGTCCTTTCAAAAGGTCTTCATCTCTACGTACAGATTCCTTCCCACCAAAAAGAACAGAGATTCTTGGAAATTGGATAAAGAAATCTCAAAATCTTTAGTAGAACTCATAGAGCGGAGGAGAAAATATCCAGTGGCAAATTCATGCTCGGAAGATTTGTTGGAGGTGATGATCAGGGCAATTTTTGACATTGTTGAAGAATGCAAGAGCTTTTTCTTCGCCGGAAAACATACGACGGCGAATTTGTTGACATGGACAACAATTCTCCTAGCAATGCACCCTCAATGGCAAAAATTGGCTAGGGAAGAGGTCTTGAGAGTGTGTGGGGCACGTGACATCCCAAGCAAAGATGATTTTTCAAAGCTTAAGACGCTGGGTATGATCCTGAACGAGTCACTGAGACTGTACCCACCAGCAGTGGCCACGATCAGACGGGCCAAAGCTGATGTTCATCTTGGAGGGTGTATGATGATCCCTCGTGGGACCGAGCTCCTCATCCCCATCTTAGCCGTCCATCACGACCCAGGGCTGTGGGGCCAAGATGCCAATGAATTCAACCCCGCTCGATTCTCGCAAGGTGTGGCCCACGCTGCCAAGCATCCCATGGCATTCCTACCCTTCGGGCTTGGTGCCCGCAGGTGCATCGGCCAAAACCTAGCCATTTTGCAGACGAAATTGGCCATGGCTATGATCCTGCAACGCTTCTCTTTCAGTCTGGCTCCCACCTACCAACATGCACCAATGGTTCTAATGCTCCTACATCCACAGTCTGGTGCACCCATAATTTTTCGTGAATTATCAGACACCATGAACTATTCATAG 1533 46.25 MEEYFLQWFWPLFSFMALVFVLKVVDYLWWRPKRIEKHFSKQGIRGPPYQFFIGNIKEIVGLTLKTSSQPMPLSDHNILPRVLSFYHHWKKIYGATFLVWFGPTSRVTISDPVLIREIFISKAEFYEKNESHPLVRKLEGDGLLTLQGEKWAHHRKIISPTFHMENVKLMIPTMGKTMAAMLDKWSTMANSDEVEIEVSEWFQRLTEEVVTRTVFGTSYEDGKSIFQLQAQQMVSAIESFQKVFISTYRFLPTKKNRDSWKLDKEISKSLVELIERRRKYPVANSCSEDLLEVMIRAIFDIVEECKSFFFAGKHTTANLLTWTTILLAMHPQWQKLAREEVLRVCGARDIPSKDDFSKLKTLGMILNESLRLYPPAVATIRRAKADVHLGGCMMIPRGTELLIPILAVHHDPGLWGQDANEFNPARFSQGVAHAAKHPMAFLPFGLGARRCIGQNLAILQTKLAMAMILQRFSFSLAPTYQHAPMVLMLLHPQSGAPIIFRELSDTMNYS* 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5785787 5788706 + Vvi9g479 Vvi9g479 792190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g479 510 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 Pfam Cytochrome P450 83 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PANTHER CYTOCHROMEA2 6 498 - -
Vvi9g479 510 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g479 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vvi9g479 510 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 498 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g479 K15639 - vvi:100263507 1020.76