Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g495 ATGAAAGTGATTGGGAGAAAGGGTTATGTCTCTTTTATTGATTATAAGGTACTAGAAACTGCAACAAACAATTTTCAGGAAAGTAATATCCTGGGTGAGGGCGGGTTTGGTTGTGTCTACAAGGCGCGGTTGGATGATAACTCCCATGTGGCTGTGAAGAAGGTAGATGGTAGAGGCCAGGATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTGACTAAAATTCAGCACCCAAATATAATTTCTCTCCTGGGTTACAGCAGGCATGAGGAGTCAAAGTTTCTTGTCTATGAGCTGATGCAAAATGGATCTCTGGAAACTCAATTGCACGGACCTTCTCATGGATCATCTCTAACTTGGCATATTCGAATGAAAATCACTTTGGATGCAGCAAGAGGATTAGAGTATCTACATGAGCACTGCAACCCACCAGTCATCCATAGAGATCTTAAATCATCTAATATTCTTCTGGATTCAAACTTCAATGCCAAGCTTTCGAATTTTGGTCTAGCTGTAATTGATGGGCCTAAAAACAAGAACAACTTGAAGCTTTCAGGCACCCTGGGTTATCTAGCTCCTGAGTATCTTTTAGATGGTACAGAATCTAAACTTCTTATAATTGCTCAAAACTGTTGGTATGGGATTCCTGAAAGAGGGTTAGTTGATTCACTAACTTGGGAACTCTATTTCAGATTGACAAAGTCAGACTTCCGGGAGCCAGTGAATATTGGAAGTGATGAAATGGTTAGTATGAATGAGATGGCTGAAATTGTCCTAAGCTTTGAGAATAAGAACCTACCCATCCATCACATTCCTGGCCCAGAGGGCGTACGTGGTCGAAACTCACACAATAATCTGATCAAGGAGAAGCTTGTTGGTTTCCCATGTTGTTCTCCAGAGGCTGAACTACTACATTTTGTGACAAGCGCAGAGTTTTGCAGTAAGGATTCAGCTGATGGATCCTTAGAGGTTTTGAGCATTACTCACTTTCTACTTTCTTCCCATCTAACTTCAGAAAAGGCATCTTGA 1032 41.18 MKVIGRKGYVSFIDYKVLETATNNFQESNILGEGGFGCVYKARLDDNSHVAVKKVDGRGQDAEREFENEVDLLTKIQHPNIISLLGYSRHEESKFLVYELMQNGSLETQLHGPSHGSSLTWHIRMKITLDAARGLEYLHEHCNPPVIHRDLKSSNILLDSNFNAKLSNFGLAVIDGPKNKNNLKLSGTLGYLAPEYLLDGTESKLLIIAQNCWYGIPERGLVDSLTWELYFRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSHNNLIKEKLVGFPCCSPEAELLHFVTSAEFCSKDSADGSLEVLSITHFLLSSHLTSEKAS* 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6039188 6040954 + Vvi9g495 Vvi9g495 792206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g495 343 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Vvi9g495 343 Pfam Protein kinase domain 25 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g495 343 SUPERFAMILY Protein kinase-like (PK-like) 10 201 IPR011009 -
Vvi9g495 343 SMART serkin_6 25 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g495 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Vvi9g495 343 Gene3D Transferase(Phosphotransferase) domain 1 101 206 - -
Vvi9g495 343 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 311 - -
Vvi9g495 343 PANTHER OS01G0253100 PROTEIN 5 311 IPR045271 GO:0004714|GO:0006468
Vvi9g495 343 Gene3D Phosphorylase Kinase; domain 1 3 100 - -
Vvi9g495 343 Gene3D - 236 342 - -
Vvi9g495 343 ProSiteProfiles Protein kinase domain profile. 25 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76866 PF00069 Pkinase 1.00E-37 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g495 - - vvi:100253157 421.394