Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g505 ATGTATGGAAGAAGGGCATGTCAGCTGATAAAGGAATTCTCATCTGCTGAAAAAGGGCAGCTCACTGGTTTCAATAGTGACATGTTTGATCAAGTAGTCAAAGAATGCAGTACTCATTACCTTGAACTTCAATCTTTGATGAGGAAAATCCAGGAAGAAGGAATGGACATTCAAACAACTAGAAATGCTGATCACTTTGGGATGGTCATCCACCATCTTTCTTTAATGCGCAACAAGCGCTGCCTTATGGCATATGTGTATAATCGAGCAGAAATTATTAGAAATTTGAGATGGAAGATAGGGCCTGTTCTCCCTCAAGAAATTCATGAGAAGCTTAGCTACTCAGAGGAGGAGTATTTCAAGAATCATTCTACAGCTCTAGAATCATATATGTCAGAACTGGAGCTTGATTTGACAGTGGATATGGTGCCGCCCAAAGATCCCTACATCCAGGTGAGAGTCCTTGATGACATTGGTGAGGTGTTGCTTAGTGATCAGTCAGCCAACCTTGCTTGCCACTCAATGCACTTTCTTAAGCGGATTGATGCTGAGCAGTTCATCTCTCAGGGCTTGATGGAGGAGCTCACAGACTGA 594 42.59 MYGRRACQLIKEFSSAEKGQLTGFNSDMFDQVVKECSTHYLELQSLMRKIQEEGMDIQTTRNADHFGMVIHHLSLMRNKRCLMAYVYNRAEIIRNLRWKIGPVLPQEIHEKLSYSEEEYFKNHSTALESYMSELELDLTVDMVPPKDPYIQVRVLDDIGEVLLSDQSANLACHSMHFLKRIDAEQFISQGLMEELTD* 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6247226 6261774 - Vvi9g505 Vvi9g505 792216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g505 197 PANTHER PARTNER OF SLD5 1 193 IPR005339 GO:0000811|GO:0006260
Vvi9g505 197 Pfam GINS complex protein 52 116 IPR021151 -
Vvi9g505 197 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Vvi9g505 197 Gene3D - 1 134 - -
Vvi9g505 197 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g505 K10732 - vvi:100256728 398.667