Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g516 ATGTGTATACCTCTTTGCTTGGCCTTCCGCTATGGCCCTATAGTTTTCCTCCGTCTTGGTTCACGCCCTTCCCTTATTGTTTCTTCACCTTCTGTTGCTGAGGAATGTCTGACCAAAAACGATATCGTTTTTGCCAACCGCCCTCAGCTTATCGCCGGGAAATACATAGGCTACAACTACACCAGCCTCATCTGGGCCAACTATGGCGATCACTGGCGGAACCTCCGGCGAATCTCGACCCTCGAAATCCTCTCCTCCAGTTGCATTCAGATGCTTTCTGGAATTCGTGCTGATGAGGTGCGATATGAGCAACATCGGAGATTATTTACCGATGTTGAGAACAAGAATTGCCAAGGACAAGGAAAGAAGACGATGATTGAAGTGATGCTGTCGCTACAAGAGAAGGAACCTGATTACTATACGGACCTGATCATCAGAGGCCTCATGCTGGCTCTACTGGGAGCTGGAACTGATACCACAGCCACGACTATAGAATGGACACTATCACTTCTGCTGAACAACCCACATGCCCTAAAGAAGGCACAAATGGAGATTGATAATCATCTGGGGGACAACCATCTCATCCAAGAATCAGATTTAAACCAGCTTCCATATCTCCATTGTATCATAAAGGAGTCGCAGCGCATGCACCCTGTAGGCCCAATAATACCTCATGAGTCGTCCGGCGAGTGCACAGTAGGTGGTTATCGCATACCTCATGGGACGATGCTACTTGTTAATGTATGGGCTATACAGAATGACCCTAGAGTCTGGGAGGAGCCAAGGAAGTTCACGCCGGAGAGATTTGAGGGCATGGAACTGGAGAAACATGGGTTCAGGCTAATGCCATTTGGGTCAGGCAGGAGGGGTTGCCCTGGGGAGGGCTTAGCCGTACGTATGGTTGGGCTGGTGTTGGGATCATTGATTCAGTGCTTTGATTGGGAAAGTGTAGGTGAAGGGATGGTGGACATGAGTGAGGGGACTGGTCTTTCTTTGCCAAAGGCTCAGCCCTTGTTGGTTAGGTGTAGGCATCGTCCAGCCTTAGTGGACCTTCTTTCAAAAGCTTGA 1068 49.16 MCIPLCLAFRYGPIVFLRLGSRPSLIVSSPSVAEECLTKNDIVFANRPQLIAGKYIGYNYTSLIWANYGDHWRNLRRISTLEILSSSCIQMLSGIRADEVRYEQHRRLFTDVENKNCQGQGKKTMIEVMLSLQEKEPDYYTDLIIRGLMLALLGAGTDTTATTIEWTLSLLLNNPHALKKAQMEIDNHLGDNHLIQESDLNQLPYLHCIIKESQRMHPVGPIIPHESSGECTVGGYRIPHGTMLLVNVWAIQNDPRVWEEPRKFTPERFEGMELEKHGFRLMPFGSGRRGCPGEGLAVRMVGLVLGSLIQCFDWESVGEGMVDMSEGTGLSLPKAQPLLVRCRHRPALVDLLSKA* 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6425288 6427661 + Vvi9g516 Vvi9g516 792227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g516 355 PRINTS P450 superfamily signature 155 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS P450 superfamily signature 208 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS P450 superfamily signature 282 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS P450 superfamily signature 291 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 284 293 IPR017972 GO:0005506|GO:0016705
Vvi9g516 355 Gene3D Cytochrome P450 101 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 Pfam Cytochrome P450 9 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 Pfam Cytochrome P450 102 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 Gene3D Cytochrome P450 6 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 5 7 103 - -
Vvi9g516 355 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 5 113 353 - -
Vvi9g516 355 SUPERFAMILY Cytochrome P450 7 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS E-class P450 group IV signature 146 172 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS E-class P450 group IV signature 203 219 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS E-class P450 group IV signature 252 270 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS E-class P450 group IV signature 275 291 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PRINTS E-class P450 group IV signature 291 309 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g516 355 PANTHER CYTOCHROME P450 82C3-RELATED 113 353 - -
Vvi9g516 355 PANTHER CYTOCHROME P450 82C3-RELATED 7 103 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g516 - - vvi:100249221 454.907