Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g516 | ATGTGTATACCTCTTTGCTTGGCCTTCCGCTATGGCCCTATAGTTTTCCTCCGTCTTGGTTCACGCCCTTCCCTTATTGTTTCTTCACCTTCTGTTGCTGAGGAATGTCTGACCAAAAACGATATCGTTTTTGCCAACCGCCCTCAGCTTATCGCCGGGAAATACATAGGCTACAACTACACCAGCCTCATCTGGGCCAACTATGGCGATCACTGGCGGAACCTCCGGCGAATCTCGACCCTCGAAATCCTCTCCTCCAGTTGCATTCAGATGCTTTCTGGAATTCGTGCTGATGAGGTGCGATATGAGCAACATCGGAGATTATTTACCGATGTTGAGAACAAGAATTGCCAAGGACAAGGAAAGAAGACGATGATTGAAGTGATGCTGTCGCTACAAGAGAAGGAACCTGATTACTATACGGACCTGATCATCAGAGGCCTCATGCTGGCTCTACTGGGAGCTGGAACTGATACCACAGCCACGACTATAGAATGGACACTATCACTTCTGCTGAACAACCCACATGCCCTAAAGAAGGCACAAATGGAGATTGATAATCATCTGGGGGACAACCATCTCATCCAAGAATCAGATTTAAACCAGCTTCCATATCTCCATTGTATCATAAAGGAGTCGCAGCGCATGCACCCTGTAGGCCCAATAATACCTCATGAGTCGTCCGGCGAGTGCACAGTAGGTGGTTATCGCATACCTCATGGGACGATGCTACTTGTTAATGTATGGGCTATACAGAATGACCCTAGAGTCTGGGAGGAGCCAAGGAAGTTCACGCCGGAGAGATTTGAGGGCATGGAACTGGAGAAACATGGGTTCAGGCTAATGCCATTTGGGTCAGGCAGGAGGGGTTGCCCTGGGGAGGGCTTAGCCGTACGTATGGTTGGGCTGGTGTTGGGATCATTGATTCAGTGCTTTGATTGGGAAAGTGTAGGTGAAGGGATGGTGGACATGAGTGAGGGGACTGGTCTTTCTTTGCCAAAGGCTCAGCCCTTGTTGGTTAGGTGTAGGCATCGTCCAGCCTTAGTGGACCTTCTTTCAAAAGCTTGA | 1068 | 49.16 | MCIPLCLAFRYGPIVFLRLGSRPSLIVSSPSVAEECLTKNDIVFANRPQLIAGKYIGYNYTSLIWANYGDHWRNLRRISTLEILSSSCIQMLSGIRADEVRYEQHRRLFTDVENKNCQGQGKKTMIEVMLSLQEKEPDYYTDLIIRGLMLALLGAGTDTTATTIEWTLSLLLNNPHALKKAQMEIDNHLGDNHLIQESDLNQLPYLHCIIKESQRMHPVGPIIPHESSGECTVGGYRIPHGTMLLVNVWAIQNDPRVWEEPRKFTPERFEGMELEKHGFRLMPFGSGRRGCPGEGLAVRMVGLVLGSLIQCFDWESVGEGMVDMSEGTGLSLPKAQPLLVRCRHRPALVDLLSKA* | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6425288 | 6427661 | + | Vvi9g516 | Vvi9g516 | 792227 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g516 | 355 | PRINTS | P450 superfamily signature | 155 | 172 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | P450 superfamily signature | 208 | 219 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | P450 superfamily signature | 282 | 291 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | P450 superfamily signature | 291 | 302 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 284 | 293 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi9g516 | 355 | Gene3D | Cytochrome P450 | 101 | 349 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | Pfam | Cytochrome P450 | 9 | 86 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | Pfam | Cytochrome P450 | 102 | 334 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | Gene3D | Cytochrome P450 | 6 | 100 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 5 | 7 | 103 | - | - | |
Vvi9g516 | 355 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 5 | 113 | 353 | - | - | |
Vvi9g516 | 355 | SUPERFAMILY | Cytochrome P450 | 7 | 345 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | E-class P450 group IV signature | 146 | 172 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | E-class P450 group IV signature | 203 | 219 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | E-class P450 group IV signature | 252 | 270 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | E-class P450 group IV signature | 275 | 291 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PRINTS | E-class P450 group IV signature | 291 | 309 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi9g516 | 355 | PANTHER | CYTOCHROME P450 82C3-RELATED | 113 | 353 | - | - | |
Vvi9g516 | 355 | PANTHER | CYTOCHROME P450 82C3-RELATED | 7 | 103 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g516 | - | - | vvi:100249221 | 454.907 |