Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g537 ATGTCTGAATTCAATGAGATTCCGCTTCATGGAACGCTCCACGCTACGATATTTGAGATCGACAGGCTCCACAGCGGAGGCGCTCCCAAATTCTTCCGAAAGCTTGTGGAGAACATTGAGGAGACTGTCGGTTTTGGCAAAGGAACCTCTAAACTCTATGCAACTATTGATATAGGAAGAGCTAGAGTTGGGAGGACTCGGATGATAGAAAATGAACCCTCCAATCCCAGGTGGTATGAATCATTTCACATTTACTGTGCCCATATGGCCGGGCATATTATATTCACTGTAAAAGATGACAATCCCATTGGGGCGACTTTGATTGGAAGAGCATCTGTACCTATTCAGGAGATCTTAGGGGGAGAGGAAGTAGATAAATGGGTAGAAATTGTTAATGAAGAGCTGAAGCCTATACATGGAGGTTCTAAGATCCATGTGAAACTACAATATTTTGAAGTCACTGCAGATCGTAGTTGGGGTCGGGGAATTAGAAATGCTCATGTTCCAGATAATTTTGTCCCAAAAATACCCCTCGCCGATGGCAAGTACTATGAGCCCCGCAGATGTTGGGAAGATGTCTTTGATGCAATCAATAACGCAAAACACTTGATCTACATTACTGGCTGGTCTGTATACACAGAAATCACCTTGGTGCGGGACTCAAGGAGACCAAAACCAGGAGGAGACTTGACCATTGGTGAGTTGCTTAAGAAGAAGGCAAGTGAAGGTGTTAGGGTTCTAATGCTTGTTTGGGATGATCGAACGTCTGTTCCTTTACTGAAAAAGGATGGCTTGATGGGTACCCATGACGAAGAAACTGAACATTACTTTCACGACACTGATGTACACTGTGTATTGTGCCCCCGCAATCCTGATGATGGTGGAAGTATAGTTCAGGATTTACAAATTTCTACCATGTTCACTCATCACCAGAAGATTGTTGTGGTGGACAGCGAGATGCCCAGTGGAGGATCAGAAAAGAGGAGGATTGACACTAGACACAGCACACCATGA 1014 44.38 MSEFNEIPLHGTLHATIFEIDRLHSGGAPKFFRKLVENIEETVGFGKGTSKLYATIDIGRARVGRTRMIENEPSNPRWYESFHIYCAHMAGHIIFTVKDDNPIGATLIGRASVPIQEILGGEEVDKWVEIVNEELKPIHGGSKIHVKLQYFEVTADRSWGRGIRNAHVPDNFVPKIPLADGKYYEPRRCWEDVFDAINNAKHLIYITGWSVYTEITLVRDSRRPKPGGDLTIGELLKKKASEGVRVLMLVWDDRTSVPLLKKDGLMGTHDEETEHYFHDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSEMPSGGSEKRRIDTRHSTP* 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6678925 6683654 + Vvi9g537 Vvi9g537 792248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g537 337 SUPERFAMILY Phospholipase D/nuclease 170 319 - -
Vvi9g537 337 ProSiteProfiles C2 domain profile. 1 128 IPR000008 -
Vvi9g537 337 CDD C2_plant_PLD 9 151 - -
Vvi9g537 337 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 152 IPR035892 -
Vvi9g537 337 SMART C2_3c 12 127 IPR000008 -
Vvi9g537 337 PANTHER PHOSPHOLIPASE D 8 166 IPR015679 -
Vvi9g537 337 PANTHER PHOSPHOLIPASE D 165 330 IPR015679 -
Vvi9g537 337 PANTHER PHOSPHOLIPASE D 8 166 - -
Vvi9g537 337 PANTHER PHOSPHOLIPASE D 165 330 - -
Vvi9g537 337 Gene3D C2 domain 10 159 IPR035892 -
Vvi9g537 337 Pfam C2 domain 39 130 IPR000008 -
Vvi9g537 337 Gene3D Endonuclease Chain A 177 324 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g479 Vvi9g537 ECH
Vvi9g537 Vvi11g474 ECH
Vvi9g537 Vvi11g475 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g537 K01115 - vvi:100232987 653.284