Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g538 | ATGATTTATGTTCATGCCAAGATGATGATTGTTGATGACGAATACATCATAATCGGATCCGCCAACATCAACCAGAGATCCATGGATGGTGCCAGAGACTCCGAGATAGCCATGGGAGGATACCAACCATATCACTTGGCAAGCAGGCAGCCAGCACGAGGTCAGATCCATGGTTTCCGAATGTCATTGTGGTACGAGCACCTTGGCATGCTCGATGAGTCCTTCCTCCAGCCAGAAAGCAAGGAGTGCATCCAAAAGGTGAACCAGATCGCTGAAAAATACTGGGATCTGTACGCAAGCGAGACACTTGAGCATGACCTCCCTGGTCATCTCCTCCGCTACCCTATAGCGGTCTCCTGTGGGGGAGACATAACAGAGCTTCCAGGAGCTGAGTTTTTCCCCGACACCAAGGCCCGCGTTCTTGGCACCAAGTCCGAATATTTGCCTCCAATCCTCACAACTTAG | 465 | 50.75 | MIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLASRQPARGQIHGFRMSLWYEHLGMLDESFLQPESKECIQKVNQIAEKYWDLYASETLEHDLPGHLLRYPIAVSCGGDITELPGAEFFPDTKARVLGTKSEYLPPILTT* | 155 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6683709 | 6685577 | + | Vvi9g538 | Vvi9g538 | 792249 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g538 | 154 | SUPERFAMILY | Phospholipase D/nuclease | 2 | 84 | - | - | |
Vvi9g538 | 154 | SMART | pld_4 | 1 | 27 | IPR001736 | GO:0003824 | |
Vvi9g538 | 154 | PANTHER | PHOSPHOLIPASE D | 1 | 154 | IPR015679 | - | |
Vvi9g538 | 154 | PANTHER | PHOSPHOLIPASE D ALPHA 1 | 1 | 154 | - | - | |
Vvi9g538 | 154 | Pfam | Phospholipase D C terminal | 72 | 144 | IPR024632 | - | |
Vvi9g538 | 154 | Gene3D | Endonuclease Chain A | 1 | 49 | - | - | |
Vvi9g538 | 154 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 1 | 27 | IPR001736 | GO:0003824 | |
Vvi9g538 | 154 | Pfam | Phospholipase D Active site motif | 1 | 27 | IPR001736 | GO:0003824 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g538 | K01115 | - | vvi:100232987 | 320.087 |