Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g67 ATGGAACCGCCGGAAAGTATTACGTTGGATGCTGCGGAGAAGATAATCTTGCGGTGGGACTCGACGGCGTCGGAGGAGACGAGAGATCGGTTGATCTTCGAAGGCGATCGGCGGGAGGTGGATCAGTATTTGCAGGCCGTGGATGAAATCCAGCGGTCGATGTCGGCGGCGACGATTTCCGACGGTGACTGTAAAGTGAACAGCACTATCCAGATCGCCATGGCGAGGCTGGAGGATGAGTTTCGGAGCATTCTGATCAGCAACACCAGTCCGCTGGAGACTGATTCGCTTATCGATTCAAGTTTTTCGACTCACTCGAGTTTGATAACCGAACACACGAGCGCGAGTTATCGATCTACGAATAGTATTCGCGAGCTGGATCTGATTCCAGCTGAAGCAATCGACGATCTTCGATGCATAGCCGAGAGGATGATCTCTGCCGGATATCTCCGCGAGTGCGTTCAGGTGTACGGGAGCGTACGGAAGTCAGCTGTGGACTCGAGCTTTCGACGGCTCGGTGTCGAGAATCTGAGCATCGGCGATATCCAACGGCGGGAGTGGGATGTGTTGGAGGTGAAGATCAGGCGTTGGATAAGAGCCGCTAAAGTGTGCGTGAGGATTCTGTTTGCTAGCGAAAAGAGGCTTTGTGAGCAAATCTTCAAAGGTCTAGACACCGCTATCGATGATGCTTGCTTCATAGAAACTGTTAAAGGTCCAGCAATTCAACTCTTTAAATTCGCTGAAGCGATAAGCATAAGTCGGAGAACGCCGGAGAAGTTGTTCAAGATGCTGGACCTTCACGATGCTTTATTGGACCTGTTACCGGATATTGATGCCGTTTTTGAATCAGAATTGTCAGAATCTATTCGAATTCAGGCAGCTGAGATCCTATCACGCTTGGCGGAGGCAGCCAGAGGGATATTATCGGAATTTGAGAACGCTGTGCTCTCTGAGCCTTCGAAGGTTCCGGTTCCGGGTGGAACAATTCACCCCTTGACTAGATATGTGATGAATTATATCAATTTGATATCTGATTACAAGCAAACCCTCATTGAGCTTATAGTATCAAAGCCCTCAACCGGGTCAAGATACTCCGGCGACCAGACTATGCCAGATATGGATTTTGCAGAGTTTGAGGGGCGAACTCCCTTGGCGCTTCATTTGATTTGGATTATTGTAATTTTGCAATTCAATGTGGAGGGGAAGTCCAAGTGCTACAGAGATAACGCTTTGGCTCATTTGTTCATTATGAACAATGTTCACTACATTGTTCAGAAGGCCAAAGGGTCAGAGGAACTGCGGGAGATTATTGGTGATGATTACTTAAAGAAGTTAACATGGAAATACCAACAGGCGGCTACTAGCTACCAGAGAACAACTTGGGTGAGGGTGCTGTATTGTTTGAGGGATGAGGGGTTGCATGTGAGTGGAAGTTTTTCCTCTGGGGTCTCAAAGAGTGCTTTGAGAGAGAGGTTCAAGGCCTTCAATGCTATGTTTGAGGAGGTTCATAGGACCCAGGCAATGTGGCATGTGCCAGATTCTCAGCTCCGGGAGGAGCTTCGGATATCTATAACAGAGAAGTTGCTCCCAGCTTATAGGTCATTTCTTGGGCGGTTCAGGAGCCATATAGAGAGTGGAAGGCACCCAGAGAATTACATCAAGTACTCAGCAGACGATTTAGAGACTGCTGTCTTGGACTTCTTTGAGGGATACCCGGTCTCACAGCACTTGAGAAGGAGATCTCAGTGA 1749 48.43 MEPPESITLDAAEKIILRWDSTASEETRDRLIFEGDRREVDQYLQAVDEIQRSMSAATISDGDCKVNSTIQIAMARLEDEFRSILISNTSPLETDSLIDSSFSTHSSLITEHTSASYRSTNSIRELDLIPAEAIDDLRCIAERMISAGYLRECVQVYGSVRKSAVDSSFRRLGVENLSIGDIQRREWDVLEVKIRRWIRAAKVCVRILFASEKRLCEQIFKGLDTAIDDACFIETVKGPAIQLFKFAEAISISRRTPEKLFKMLDLHDALLDLLPDIDAVFESELSESIRIQAAEILSRLAEAARGILSEFENAVLSEPSKVPVPGGTIHPLTRYVMNYINLISDYKQTLIELIVSKPSTGSRYSGDQTMPDMDFAEFEGRTPLALHLIWIIVILQFNVEGKSKCYRDNALAHLFIMNNVHYIVQKAKGSEELREIIGDDYLKKLTWKYQQAATSYQRTTWVRVLYCLRDEGLHVSGSFSSGVSKSALRERFKAFNAMFEEVHRTQAMWHVPDSQLREELRISITEKLLPAYRSFLGRFRSHIESGRHPENYIKYSADDLETAVLDFFEGYPVSQHLRRRSQ* 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 661937 664024 + Vvi9g67 Vvi9g67 791778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g67 582 ProSiteProfiles Sox C-terminal domain profile. 1 123 IPR021934 -
Vvi9g67 582 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 582 IPR004140 GO:0000145|GO:0006887
Vvi9g67 582 Pfam Exo70 exocyst complex subunit 196 564 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi9g67 582 SUPERFAMILY Cullin repeat-like 13 569 IPR016159 -
Vvi9g67 582 Gene3D Exocyst complex component Exo70 15 578 - -
Vvi9g67 582 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 7 582 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g67 K07195 - vvi:100254947 1097.8