Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g7 | ATGTTGGTTCTAATTTGCGTCTTGAGGTGGGGACCAAGTTTCATCAATGGTGCCACAGATCCACAAGATGCTTCTGCTCTTAGGGTCATGTTCAGCAGTCTTAATTCACCATCTCAGCTTGCCAAATGGAGCTCAAATGGTGGTGATCCATGTGGGGAGTCATGGCAAGGCATTACATGCAAAGGCTCAAGAGTCACAGAAATAGAATTATCAGGTCTTCGACTTACTGGGTCAATGGGCTACCAGCTCACAAGTTTGACATCAGTAGTCAACCTAGACATAAGCAACAACAATCTTGGAAACCAGATACCTTATCAACTCCCTCCAAACCTGCAACGATTAAATCTTGCTGGTAATGGCTTCAATGGGGGCATTCCTTATTCTATTTCTCTGATGATTTCTCTTAAATACCTAAACATCAGTCACAATCAACTTCAGGGTCAACTGGGTGACATGTTCAGTCAGCTGTCGTCCCTCACCACATTGGATTTCTCTTTGAATTCCCTGACGGGTGACCTCCCAGAAAGTTTTAGCTCCCTCTCAAGCATAACGACAATGTTTTTGCAAAACAACCAATTTACTGGTAGTATTAATGTCCTTGCCAGTCTTCCTCTTGAAACATTGAATGTTGCCAATAACCATTTTACTGGCTGGATTCCTGAATCATTGAAGAACATTAATCTGCAGAAGGATGGTAACTCATGGAGCTCAGGGCCTGCACCCCCACCTCCACCAGGTACCCCTCCAGTCAGCAGAACCCCCCCAAAACACAAATCTGGTGGTAATGATGGCCCATCTGGTGGTGGTGGTGGCAGTGGTGGCAAATCGGGAATAGGCGGTGGTGGAATAGCAGGAATAGTGATATCCATCCTTGTTATTGGGGCGATAATAACATTCTTTTTAGTGAAGAGAAGATCTAGAAGGCCATCTATGGATGTAGAAAAGCATGATGATCAGCCTTTTGCTCCTCTTGCTTCAAAAGAAGTACAAGAAATGAAGTCTATCCAGGCATCATCCACAATAAACACAAAGACCTATGAACCTTCAGCCTCAATTAATCTTAGACCTCCACCCATTGATCGTCACAAATCATTTGATGAAGAGGATCTTCCGAAGAAGCCCATTATTACCAAGAAGGCTAATACTGCTCCTATAAATGCAATATCATATTCAATTGCAGACCTACAGATGGCTACAGGTAGCTTTAGTGTCGAAAACCTTATTGGTGAGGGGTCTTTTGGACGTGTTTATCAGGCTCAATTTGATGATGGAAAGGTTGTTGCTGTCAAGAAAATAGATTCATCTGCTCTCCCCGATCAATTTTCTGAAGATTTCACAGAGATAGTATCTAATATCTCCCAGTTGCATCACCCAAATGTAACAGAGCTGGTGGGTTATTGTTCAGAGCACGGACAGCACCTCCTAGTTTACGAGTTCCATAAAAATGGCTCGCTGCATGATTTCCTGCATCTTTCAGATGAATACAGCAAGCCTTTGACATGGAACACCCGCGTCAAGATTGCTTTAGGGACTGCCCGTGCATTAGAGTACCTACATGAAGTTTGCTCACCATCAATTGTTCATAAAAATTTCAAATCAGCTAACATATTACTAGACACAGAGCTCAATCCACACCTTACAGACTGTGGGCTAGCAAGCTTCATCCCAAATGCTGATCAGGTACTGAACCATAATGCAGGGTCTGGATACAGTGCACCTGAGGTTGCCATGTCAGGTCAATATACTCTGAAGAGTGATGTTTACAGTTTTGGTGTAGTCATGCTGGAGCTTCTTTCTGGACGTAAACCATTTGATAGCTCCAGGTCCAGATCTGAGCAATCTTTGGTTCGATGGGCTACTCCTCAGCTTCATGACATCGATGCTCTGGCTAAAATGGTTGATCCGGCACTCAAAGGGCTCTACCCAGTCAAGTCTCTCTCCAGGTTCGCTGATGTGATTGCTCTGTGTGTCCAGCCTGAGCCAGAGTTCCGGCCACCAATGTCAGAAGTGGTGCAAGCACTGGTGCGGCTAGTCCAGCGGGCAAACATGAGCAAGAGAACCATTAGTAACGAACAAGGTGCATCTCCGAGAGGTGACAACCCAGACACACAAGACCACACATCTTGA | 2127 | 44.66 | MLVLICVLRWGPSFINGATDPQDASALRVMFSSLNSPSQLAKWSSNGGDPCGESWQGITCKGSRVTEIELSGLRLTGSMGYQLTSLTSVVNLDISNNNLGNQIPYQLPPNLQRLNLAGNGFNGGIPYSISLMISLKYLNISHNQLQGQLGDMFSQLSSLTTLDFSLNSLTGDLPESFSSLSSITTMFLQNNQFTGSINVLASLPLETLNVANNHFTGWIPESLKNINLQKDGNSWSSGPAPPPPPGTPPVSRTPPKHKSGGNDGPSGGGGGSGGKSGIGGGGIAGIVISILVIGAIITFFLVKRRSRRPSMDVEKHDDQPFAPLASKEVQEMKSIQASSTINTKTYEPSASINLRPPPIDRHKSFDEEDLPKKPIITKKANTAPINAISYSIADLQMATGSFSVENLIGEGSFGRVYQAQFDDGKVVAVKKIDSSALPDQFSEDFTEIVSNISQLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLSDEYSKPLTWNTRVKIALGTARALEYLHEVCSPSIVHKNFKSANILLDTELNPHLTDCGLASFIPNADQVLNHNAGSGYSAPEVAMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTISNEQGASPRGDNPDTQDHTS* | 709 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 146721 | 157241 | + | Vvi9g7 | Vvi9g7 | 791718 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g7 | 708 | Pfam | Leucine rich repeat | 134 | 193 | IPR001611 | GO:0005515 | |
Vvi9g7 | 708 | MobiDBLite | consensus disorder prediction | 685 | 702 | - | - | |
Vvi9g7 | 708 | Pfam | Leucine rich repeat N-terminal domain | 21 | 60 | IPR013210 | - | |
Vvi9g7 | 708 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 | 12 | 702 | - | - | |
Vvi9g7 | 708 | ProSitePatterns | Protein kinases ATP-binding region signature. | 408 | 431 | IPR017441 | GO:0005524 | |
Vvi9g7 | 708 | MobiDBLite | consensus disorder prediction | 237 | 252 | - | - | |
Vvi9g7 | 708 | Pfam | Protein tyrosine and serine/threonine kinase | 404 | 674 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi9g7 | 708 | PANTHER | OS01G0253100 PROTEIN | 12 | 702 | IPR045271 | GO:0004714|GO:0006468 | |
Vvi9g7 | 708 | Gene3D | Phosphorylase Kinase; domain 1 | 367 | 479 | - | - | |
Vvi9g7 | 708 | ProSiteProfiles | Protein kinase domain profile. | 402 | 677 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi9g7 | 708 | MobiDBLite | consensus disorder prediction | 229 | 274 | - | - | |
Vvi9g7 | 708 | SUPERFAMILY | Protein kinase-like (PK-like) | 385 | 674 | IPR011009 | - | |
Vvi9g7 | 708 | CDD | STKc_IRAK | 408 | 677 | - | - | |
Vvi9g7 | 708 | Gene3D | Transferase(Phosphotransferase) domain 1 | 481 | 697 | - | - | |
Vvi9g7 | 708 | SUPERFAMILY | L domain-like | 19 | 225 | - | - | |
Vvi9g7 | 708 | MobiDBLite | consensus disorder prediction | 685 | 708 | - | - | |
Vvi9g7 | 708 | Gene3D | Ribonuclease Inhibitor | 20 | 241 | IPR032675 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76872 | PF07714 | PK_Tyr_Ser-Thr | 4.60E-44 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g7 | - | - | vvi:100249831 | 1328.92 |