Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g7 ATGTTGGTTCTAATTTGCGTCTTGAGGTGGGGACCAAGTTTCATCAATGGTGCCACAGATCCACAAGATGCTTCTGCTCTTAGGGTCATGTTCAGCAGTCTTAATTCACCATCTCAGCTTGCCAAATGGAGCTCAAATGGTGGTGATCCATGTGGGGAGTCATGGCAAGGCATTACATGCAAAGGCTCAAGAGTCACAGAAATAGAATTATCAGGTCTTCGACTTACTGGGTCAATGGGCTACCAGCTCACAAGTTTGACATCAGTAGTCAACCTAGACATAAGCAACAACAATCTTGGAAACCAGATACCTTATCAACTCCCTCCAAACCTGCAACGATTAAATCTTGCTGGTAATGGCTTCAATGGGGGCATTCCTTATTCTATTTCTCTGATGATTTCTCTTAAATACCTAAACATCAGTCACAATCAACTTCAGGGTCAACTGGGTGACATGTTCAGTCAGCTGTCGTCCCTCACCACATTGGATTTCTCTTTGAATTCCCTGACGGGTGACCTCCCAGAAAGTTTTAGCTCCCTCTCAAGCATAACGACAATGTTTTTGCAAAACAACCAATTTACTGGTAGTATTAATGTCCTTGCCAGTCTTCCTCTTGAAACATTGAATGTTGCCAATAACCATTTTACTGGCTGGATTCCTGAATCATTGAAGAACATTAATCTGCAGAAGGATGGTAACTCATGGAGCTCAGGGCCTGCACCCCCACCTCCACCAGGTACCCCTCCAGTCAGCAGAACCCCCCCAAAACACAAATCTGGTGGTAATGATGGCCCATCTGGTGGTGGTGGTGGCAGTGGTGGCAAATCGGGAATAGGCGGTGGTGGAATAGCAGGAATAGTGATATCCATCCTTGTTATTGGGGCGATAATAACATTCTTTTTAGTGAAGAGAAGATCTAGAAGGCCATCTATGGATGTAGAAAAGCATGATGATCAGCCTTTTGCTCCTCTTGCTTCAAAAGAAGTACAAGAAATGAAGTCTATCCAGGCATCATCCACAATAAACACAAAGACCTATGAACCTTCAGCCTCAATTAATCTTAGACCTCCACCCATTGATCGTCACAAATCATTTGATGAAGAGGATCTTCCGAAGAAGCCCATTATTACCAAGAAGGCTAATACTGCTCCTATAAATGCAATATCATATTCAATTGCAGACCTACAGATGGCTACAGGTAGCTTTAGTGTCGAAAACCTTATTGGTGAGGGGTCTTTTGGACGTGTTTATCAGGCTCAATTTGATGATGGAAAGGTTGTTGCTGTCAAGAAAATAGATTCATCTGCTCTCCCCGATCAATTTTCTGAAGATTTCACAGAGATAGTATCTAATATCTCCCAGTTGCATCACCCAAATGTAACAGAGCTGGTGGGTTATTGTTCAGAGCACGGACAGCACCTCCTAGTTTACGAGTTCCATAAAAATGGCTCGCTGCATGATTTCCTGCATCTTTCAGATGAATACAGCAAGCCTTTGACATGGAACACCCGCGTCAAGATTGCTTTAGGGACTGCCCGTGCATTAGAGTACCTACATGAAGTTTGCTCACCATCAATTGTTCATAAAAATTTCAAATCAGCTAACATATTACTAGACACAGAGCTCAATCCACACCTTACAGACTGTGGGCTAGCAAGCTTCATCCCAAATGCTGATCAGGTACTGAACCATAATGCAGGGTCTGGATACAGTGCACCTGAGGTTGCCATGTCAGGTCAATATACTCTGAAGAGTGATGTTTACAGTTTTGGTGTAGTCATGCTGGAGCTTCTTTCTGGACGTAAACCATTTGATAGCTCCAGGTCCAGATCTGAGCAATCTTTGGTTCGATGGGCTACTCCTCAGCTTCATGACATCGATGCTCTGGCTAAAATGGTTGATCCGGCACTCAAAGGGCTCTACCCAGTCAAGTCTCTCTCCAGGTTCGCTGATGTGATTGCTCTGTGTGTCCAGCCTGAGCCAGAGTTCCGGCCACCAATGTCAGAAGTGGTGCAAGCACTGGTGCGGCTAGTCCAGCGGGCAAACATGAGCAAGAGAACCATTAGTAACGAACAAGGTGCATCTCCGAGAGGTGACAACCCAGACACACAAGACCACACATCTTGA 2127 44.66 MLVLICVLRWGPSFINGATDPQDASALRVMFSSLNSPSQLAKWSSNGGDPCGESWQGITCKGSRVTEIELSGLRLTGSMGYQLTSLTSVVNLDISNNNLGNQIPYQLPPNLQRLNLAGNGFNGGIPYSISLMISLKYLNISHNQLQGQLGDMFSQLSSLTTLDFSLNSLTGDLPESFSSLSSITTMFLQNNQFTGSINVLASLPLETLNVANNHFTGWIPESLKNINLQKDGNSWSSGPAPPPPPGTPPVSRTPPKHKSGGNDGPSGGGGGSGGKSGIGGGGIAGIVISILVIGAIITFFLVKRRSRRPSMDVEKHDDQPFAPLASKEVQEMKSIQASSTINTKTYEPSASINLRPPPIDRHKSFDEEDLPKKPIITKKANTAPINAISYSIADLQMATGSFSVENLIGEGSFGRVYQAQFDDGKVVAVKKIDSSALPDQFSEDFTEIVSNISQLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLSDEYSKPLTWNTRVKIALGTARALEYLHEVCSPSIVHKNFKSANILLDTELNPHLTDCGLASFIPNADQVLNHNAGSGYSAPEVAMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTISNEQGASPRGDNPDTQDHTS* 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 146721 157241 + Vvi9g7 Vvi9g7 791718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g7 708 Pfam Leucine rich repeat 134 193 IPR001611 GO:0005515
Vvi9g7 708 MobiDBLite consensus disorder prediction 685 702 - -
Vvi9g7 708 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Vvi9g7 708 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 12 702 - -
Vvi9g7 708 ProSitePatterns Protein kinases ATP-binding region signature. 408 431 IPR017441 GO:0005524
Vvi9g7 708 MobiDBLite consensus disorder prediction 237 252 - -
Vvi9g7 708 Pfam Protein tyrosine and serine/threonine kinase 404 674 IPR001245 GO:0004672|GO:0006468
Vvi9g7 708 PANTHER OS01G0253100 PROTEIN 12 702 IPR045271 GO:0004714|GO:0006468
Vvi9g7 708 Gene3D Phosphorylase Kinase; domain 1 367 479 - -
Vvi9g7 708 ProSiteProfiles Protein kinase domain profile. 402 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g7 708 MobiDBLite consensus disorder prediction 229 274 - -
Vvi9g7 708 SUPERFAMILY Protein kinase-like (PK-like) 385 674 IPR011009 -
Vvi9g7 708 CDD STKc_IRAK 408 677 - -
Vvi9g7 708 Gene3D Transferase(Phosphotransferase) domain 1 481 697 - -
Vvi9g7 708 SUPERFAMILY L domain-like 19 225 - -
Vvi9g7 708 MobiDBLite consensus disorder prediction 685 708 - -
Vvi9g7 708 Gene3D Ribonuclease Inhibitor 20 241 IPR032675 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76872 PF07714 PK_Tyr_Ser-Thr 4.60E-44 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g7 - - vvi:100249831 1328.92