Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g704 ATGAATCTTCTTCTTCCTCTTCTCCTACTACCCATCTGGGTGTTCACCACCACTTTGTTCTCTCTTCCAGTTCATGCCAGGCCTGACCCTCTTGTCTCCACCATTTATAACCCTCTTCTTCCTTCTCACTACCCACCCATTTCCCAAATTTCTGCACAACTGGAAGCTGTTTCTCCAGGAATGCCAGAGGTTAGAGTAGTGCACCATCAAGATGTGAACAAGAGAATCCTTATAGCACTTGTTGTTGCTTCCACACTTCTTGGTGGAATTTTGCTATTTCTATCTTGTTTCTGGATCCAGAGGCAAAGAAATTTGAGGAATTCGGGTCGGAAAAGCCAACAAAACTTGGATGCTGCTAAAGGGCTTTCGTTAGGTCCAATCTTGGGTAAATTCAATTCTTTAAGGGCCAATGGTAAGAAGGATTCGGTAACTGTGATTGAATATCATCTGCTAGTGGCTGCAACCAACAATTTCAGTGAAAGTAATGTTTTGGGGGAGGGTGGCTCTGGTCGGGTTTACAAAGCTCGTTTCAATGAAAACTTCCTTGCAGCTGTGAAAAGACTAGATCGTGGTGGGCAAGATGGTGAAAGAGAATTTGAGAATGAGGTTGATTGGTTGAGTAAAATTCAGCATCAGAATATAGTTTCCCTTTTGGGCTGCTGCATTCATGGTGAAACTCGGTTTCTTGTTTATGAAATGATGCAGAATGGGTCTTTGGAAGCCCAATTACATGGGCCTTCTCATGGATCAACTTTAACTTGGCATCTCCGGATGAAAATTGCTGTTGATGTTGCAAGAGGATTAGAGCATCTTCATGAGCACTGCAACCCTCCTGTCATCCATAGAGATCTAAAATCATCCAATATACTTTTGGATTCCGACTTCAATGCCAAGCTTTCTGATTTTGGCCTCGCCATAACTTCTGGGACCCAGAACAAGAACAATCTAAAGCTTTCAGGGACGGTGGGTTATGTGGCCCCGGAATATCTCTTAGATGGAAAACTAACCGATAAAAGTGATGTTTATGCCTTTGGAGTTATCCTTTTGGAGCTTCTGATGGGAAGAAAACCAGTGGAAAAGATGGCATCAGCTGAATGCCAGTCAATTGTCACATGGGCAATGCCTCAGCTCACTGACAGATCAAAGCTTCCAAACATTGTGGATCCCATTGTCAGAGATACAATGGATATGAAGCACTTATATCAAGTTTCTGCTGTAGCAGTACTATGTGTTCAACCAGAGCCAAGTTACAGGCCATTGATAACAGATGTACTGCACTCCCTTATCCCTCTTTTACCCGTTGAGCTTGGAGGATCACTAAGAATTACAGAACCTTTGCCCCCCGTCTGCCCCGAGCCTTCTTCTCATTGA 1371 43.54 MNLLLPLLLLPIWVFTTTLFSLPVHARPDPLVSTIYNPLLPSHYPPISQISAQLEAVSPGMPEVRVVHHQDVNKRILIALVVASTLLGGILLFLSCFWIQRQRNLRNSGRKSQQNLDAAKGLSLGPILGKFNSLRANGKKDSVTVIEYHLLVAATNNFSESNVLGEGGSGRVYKARFNENFLAAVKRLDRGGQDGEREFENEVDWLSKIQHQNIVSLLGCCIHGETRFLVYEMMQNGSLEAQLHGPSHGSTLTWHLRMKIAVDVARGLEHLHEHCNPPVIHRDLKSSNILLDSDFNAKLSDFGLAITSGTQNKNNLKLSGTVGYVAPEYLLDGKLTDKSDVYAFGVILLELLMGRKPVEKMASAECQSIVTWAMPQLTDRSKLPNIVDPIVRDTMDMKHLYQVSAVAVLCVQPEPSYRPLITDVLHSLIPLLPVELGGSLRITEPLPPVCPEPSSH* 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10684251 10689264 - Vvi9g704 Vvi9g704 792415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g704 456 SUPERFAMILY Protein kinase-like (PK-like) 141 428 IPR011009 -
Vvi9g704 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Vvi9g704 456 Gene3D Phosphorylase Kinase; domain 1 129 233 - -
Vvi9g704 456 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g704 456 ProSiteProfiles Protein kinase domain profile. 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g704 456 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Vvi9g704 456 PANTHER OS01G0750732 PROTEIN 7 448 - -
Vvi9g704 456 PANTHER BNAC02G46490D PROTEIN 7 448 - -
Vvi9g704 456 Pfam Protein tyrosine and serine/threonine kinase 161 388 IPR001245 GO:0004672|GO:0006468
Vvi9g704 456 Gene3D Transferase(Phosphotransferase) domain 1 234 433 - -
Vvi9g704 456 CDD STKc_IRAK 164 431 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76873 PF07714 PK_Tyr_Ser-Thr 1.50E-46 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g704 - - vvi:100252673 908.672