Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi9g712 | ATGATGGAAATCCTCTCAGCCCGTAGTGATGAGCGGGCCATAGCAACAATTCAGAAACTCCTGTTTCTAACGGGGGCCTTTGTTTTGTCGGATGCCATTCCAGGTGTAGAATGGATGGATTCACAAGGGTATTTGGGGTCGATGAAGCAGGTGGCGAAGGAAGTGGACTCTCTTGTGGGAGGTTGGGTGGAAGAACATGAGATGAGGCTCAACAGCGAGGGCAACAAGAGGCAGGATTTCATTGATGTGATGCTATCGGTGCTTGAAGATACTTCCATGTTTGGCCATTCCAGGGAAACAGTCATCAAGGCAACAATAATGATTCTCATAGTGGGAGGCACTGACACTGTGTCTACAACCTCCACATGGCTTCTGTCTGCATTATTAAACAATAAACATGCTTTGAAGTGTGCTCAAGAGGAGCTAGATCTAAAAGTTGGTAGAGGCAGGTGGGTGGAAGAATCGGATATTCCAAACCTGCTTTACCTTCAAGCCGTTATCAAGGAAACCCTGAGGCTATACACAGCAACTCCTCTATCTGCGCCACACGAAGCCATGGAAGACTGTCATGTTGCTGGCTACCACATTCCAAAAGGCACCCGCTTGTTCGTGAATGCGTGGAAGTTGCACCGTGACCCAAGTGTCTGGTCCGACCCTGAAGATTTTCAGCCGGAGAGGTTTCTGACAACCCATGCGGATTTAGATGTTTTGGGGCAGCATTTTGAGCTCATCCCATTTGGTTCTGGTAGAAGATCTTGCCCAGGGATCACCATGGCCTTAAAATTGTTACCCTTGGTGATTGGTCGGCTGCTTCAAGGGTTTGACTTGTCAACACCATTGAACGCTCCGGTGGACATGAGAGAAGGCCTGAGTATTACCTTGGCTAAGCTGACTCCTCTGGAAGTCATGCTCACCCCACGCCTTCCTTCTCAATTCTATTAG | 942 | 48.51 | MMEILSARSDERAIATIQKLLFLTGAFVLSDAIPGVEWMDSQGYLGSMKQVAKEVDSLVGGWVEEHEMRLNSEGNKRQDFIDVMLSVLEDTSMFGHSRETVIKATIMILIVGGTDTVSTTSTWLLSALLNNKHALKCAQEELDLKVGRGRWVEESDIPNLLYLQAVIKETLRLYTATPLSAPHEAMEDCHVAGYHIPKGTRLFVNAWKLHRDPSVWSDPEDFQPERFLTTHADLDVLGQHFELIPFGSGRRSCPGITMALKLLPLVIGRLLQGFDLSTPLNAPVDMREGLSITLAKLTPLEVMLTPRLPSQFY* | 314 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 10965962 | 10970974 | - | Vvi9g712 | Vvi9g712 | 792423 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi9g712 | 313 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 246 | 255 | IPR017972 | GO:0005506|GO:0016705 | |
| Vvi9g712 | 313 | PRINTS | E-class P450 group I signature | 243 | 253 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PRINTS | E-class P450 group I signature | 121 | 147 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PRINTS | E-class P450 group I signature | 164 | 182 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PRINTS | E-class P450 group I signature | 253 | 276 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PRINTS | E-class P450 group I signature | 101 | 118 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PRINTS | E-class P450 group I signature | 205 | 229 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 8 | 313 | - | - | |
| Vvi9g712 | 313 | PRINTS | P450 superfamily signature | 112 | 129 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PRINTS | P450 superfamily signature | 244 | 253 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PRINTS | P450 superfamily signature | 165 | 176 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | PANTHER | CYTOCHROME P450 82C3-RELATED | 8 | 313 | - | - | |
| Vvi9g712 | 313 | Pfam | Cytochrome P450 | 6 | 294 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | Gene3D | Cytochrome P450 | 5 | 307 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi9g712 | 313 | SUPERFAMILY | Cytochrome P450 | 13 | 307 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi9g712 | - | - | vvi:100245650 | 586.26 |