Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g776 ATGGAGGGGCAGAAGAACCAAGTTGTTGATGAAGCAAGAAGCATATTGTTTAAGAAATACGAGATGGGAAGGCTTCTTGGGCAGGGCACCTTCGCAAAGGTGTACCACGCGAAGAGGCTTGGGAGTGGGGACAGCGTTGCCATCAAGGTGATCAACAAGGACCACGTGAAGAAACAGGGCATGATGGAGCAGATCCAGCGCGAAATCTCTGTTATGCGCCTTGTTCGCCACCCCAATGTGGTGGAATTGAAGGAAGTGATGGCCACAAAGACCAAAATCTTCTTCGCCATGGAGTTCGTAAAGGGTGGTGAATTGTTCGCAAAAGTGACCAAGGGAAGGCTCAAAGAGGATTCGGCTAGAAAATACTTCCAGCAGCTTGTCAGCGCCATCGATTTTTGCCACAGCAGAGGCGTTTCCCACCGCGATCTCAAACCCGAAAACTTGCTCCTCGATGAAAACGAGAACTTGAAATGTGGGACGCCAGCATACGTGGCGCCGGAGGTGTTGAGGAAGCGAGGCTACGACGGAGCCAAGGCCGATACATGGTCTTGTGGGGTTATTCTCTATGTTCTGCTTTGCGGCTTTCTTCCATTTCGAGCAGAGAATGTTATGAAGATGTACACCAAGGTTTTCAAGGCAGAGTTCGAGTTTCCTCCATGGGTTTCGACCCAAGCAAAGCGGCTGATATCGAAGCTCCTCGTTGCTGATCCCGAGAAACGAATCACCATTTCTGCGATCATGGAGGATCCTTGGTTTCAGAAAGGTTTCAGGAAGCCTATTGCCTTTTCAATTGAAGAACAAGAGAACAACGAGGAGTGGCAAGGGTGTAGAGGGGAGGTGGAAATGGTGAGAACAAAGTCCTCACCACCTTTCTACAACGCCTTCGAGTTCATCTCCTCAATGTCATCGGGCTTCGACTTGTCCAGCTTGTTCCTGAGCAAGAGGAAGTCGGGCTCCATGTTCACCTCCAAGTGCTCCGCCTCAACCATCATGGCCAAGCTCGAATCACTGGCTAAGACGCTCAATTTCAGAGTGGTGAACGTGAAGGAGTTCAAGGTGAAAATGCAGGGGCTAGTGGATGGGCGGAAGGGGAAGTTGTCGGTAACGGCCGAGGTGTTCGAGGTGGCGCCGGCAGTGGCCTTGGTCCAATTCTCCAAGTCCGCCGGTGACACCCTGGAGTACACCAAGTTTTGTGAGGAGGAGGCCAGGCCTGCTCTCAAAGACATTGTTTGGAGTTGGCAAGGTGAAAATGAGTGCATAAATGATAATTTGTTCTCTGTTTGTATTTTTGGCGAGTCTATGACATGTGAGGAATGGTAG 1320 50.45 MEGQKNQVVDEARSILFKKYEMGRLLGQGTFAKVYHAKRLGSGDSVAIKVINKDHVKKQGMMEQIQREISVMRLVRHPNVVELKEVMATKTKIFFAMEFVKGGELFAKVTKGRLKEDSARKYFQQLVSAIDFCHSRGVSHRDLKPENLLLDENENLKCGTPAYVAPEVLRKRGYDGAKADTWSCGVILYVLLCGFLPFRAENVMKMYTKVFKAEFEFPPWVSTQAKRLISKLLVADPEKRITISAIMEDPWFQKGFRKPIAFSIEEQENNEEWQGCRGEVEMVRTKSSPPFYNAFEFISSMSSGFDLSSLFLSKRKSGSMFTSKCSASTIMAKLESLAKTLNFRVVNVKEFKVKMQGLVDGRKGKLSVTAEVFEVAPAVALVQFSKSAGDTLEYTKFCEEEARPALKDIVWSWQGENECINDNLFSVCIFGESMTCEEW* 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13115764 13117457 + Vvi9g776 Vvi9g776 792487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g776 439 Pfam NAF domain 289 345 IPR004041 GO:0007165
Vvi9g776 439 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Vvi9g776 439 PANTHER - 157 425 - -
Vvi9g776 439 PANTHER - 11 157 - -
Vvi9g776 439 Pfam Protein tyrosine and serine/threonine kinase 162 248 IPR001245 GO:0004672|GO:0006468
Vvi9g776 439 Gene3D Transferase(Phosphotransferase) domain 1 11 157 - -
Vvi9g776 439 Gene3D Transferase(Phosphotransferase) domain 1 158 289 - -
Vvi9g776 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Vvi9g776 439 Pfam Protein kinase domain 20 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g776 439 SMART serkin_6 20 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g776 439 ProSiteProfiles NAF domain profile. 287 312 IPR018451 GO:0007165
Vvi9g776 439 Gene3D Kinase associated domain 1, KA1 290 412 - -
Vvi9g776 439 SUPERFAMILY Protein kinase-like (PK-like) 16 253 IPR011009 -
Vvi9g776 439 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 11 157 - -
Vvi9g776 439 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 157 425 - -
Vvi9g776 439 CDD CIPK_C 293 407 - -
Vvi9g776 439 ProSiteProfiles Protein kinase domain profile. 20 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76874 PF00069 Pkinase 6.30E-41 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g776 - - vvi:100255067 798.89