Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g802 | ATGTCTCGCCCACCTGCTGCTCGCCTCTTGCTCTTCATCTTTTCCTTTTGGTTTGGTGCTTCTTTCATTCAGATCTGTTGTGCACAAAGCGTGGTGGTTGATCCAAAGTTGAAGTTTGAGAATCCAAGACTTCGGCAAGCCTACATTGCCCTCCAAGCATGGAAGACGGCCATTTTCTCAGACCCCTTCAACTTCACCTCCAACTGGGTTGGTCCTCAACTGGGCCTCCTCTCCGACTTGGCTCTCTTCCATCTCAACTCCAACCGCTTCTGCGGCATTGTTCCCAGCTCTTTGAAGCGCATGAAGCTCCTCTACGAGCTGGACATCAGTAACAACCGCTTCGTGGGGAGCTTCCCCAATGTGGTGTTGTCCATGCCCTCCCTCAAGTTCCTGGATCTCCGATTCAATGAGTTCGAGGGTCCAGTTCCATCCCAGCTCTTCAATAAGGATCTGGATGCAGTTTTCCTCAATGACAACAGATTCCAATTCGGCATCCCTCAGAATCTGGGCAATTCACCCGTCTCTGTTCTGGTCTTGGCCAACAACAATCTTGGGGGTTGCATTCCAGGCAGCATTGGTAAGATGGGAAAAACCCTAAATGAGATCATCCTCATGAACGACAATCTCACTTCATGCTTACCTCCTCAAATCGGCCTTCTCAAAGAGGTTACCGTGTTTGATGTGAGCTTCAATCATCTCCAAGGCTCACTGCCACCCGCCATTGGCAAGATGAAGAGCTTGGAGCAGCTGGATGTTGCCCACAACAGTTTCACCGGTGCGATTCCGCCCAGCATCTGTCAGCTGCCCAGATTGGAAAACTTCACCTATTCTTTCAACTATTTCACCGGAGAGGCTCCTGTTTGTGCTGCCATTACTGGTGATGGTCGCCAGAATTGTATCCCAGGAAAGACGGACCAGCGGTCCTCTAGTATGTGTTCCTCTCAAGCTGCACGTCCTGTGGATTGCAGCAAGTCCAAATGCGGCGGCGGCAGCACCAACGCTGGTGATCACACCCACCACCACCCCAATCACAACACTCGTCCGTGCCTCCTCCCGCCAAATCATATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCACCTCCATCATCGAATCATTACCATTATTCATCACCACCACCGCCATTATCCACAACAGGACATTACAGTTCGCCACCTCCGTCATCAAACCACTATCATTATTCACCACCACCACCACCACCACAATCATCGAGCCATTATACTTCCCCACCTCCCCCACCCACCGAAAAAGGATCACCAAATGCCCATTTTGTACCACCACCGCCACCACCTGTCTATCCACATATGACACCGCCATCCCCACCCCCGCCCTCACCTTCATCACCAAATCCGCCCCCAGAGTCTGAGATGCCTCCGTCACATCAACAACAGCCTCCATCACCTGGGCCTTTGCATCCTCTTCCTCCTTCACCACCATCTGGATGTGGCACTCCTGGATCCCTACTCCCACCACCACCACCGCCACATTCTCTACCAGTACCATTGGCACCAGCACCCAGCCATCACCACTCACAATCATACCCACCTCCCTCACAACATTGGCATCATCCACCACCGTTACACCATCAAAATTCTCCACCACCCACCAAAAACCCATATTCACCCCCTCCACCGCCTCCGGATAACGTGCCATTGCCACCAGTTATCGGGCTTCACCTTTCTGCTTCTTGTTATTTATGTATTCTTATTAATTTATATGATGAAGAAAATGATACAGACATGGGTTTTGGAAGAGGGGCATGA | 3195 | 28.2 | MSRPPAARLLLFIFSFWFGASFIQICCAQSVVVDPKLKFENPRLRQAYIALQAWKTAIFSDPFNFTSNWVGPQLGLLSDLALFHLNSNRFCGIVPSSLKRMKLLYELDISNNRFVGSFPNVVLSMPSLKFLDLRFNEFEGPVPSQLFNKDLDAVFLNDNRFQFGIPQNLGNSPVSVLVLANNNLGGCIPGSIGKMGKTLNEIILMNDNLTSCLPPQIGLLKEVTVFDVSFNHLQGSLPPAIGKMKSLEQLDVAHNSFTGAIPPSICQLPRLENFTYSFNYFTGEAPVCAAITGDGRQNCIPGKTDQRSSSMCSSQAARPVDCSKSKCGGGSTNAGDHTHHHPNHNTRPCLLPPNHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPSSNHYHYSSPPPPLSTTGHYSSPPPSSNHYHYSPPPPPPQSSSHYTSPPPPPTEKGSPNAHFVPPPPPPVYPHMTPPSPPPPSPSSPNPPPESEMPPSHQQQPPSPGPLHPLPPSPPSGCGTPGSLLPPPPPPHSLPVPLAPAPSHHHSQSYPPPSQHWHHPPPLHHQNSPPPTKNPYSPPPPPPDNVPLPPVIGLHLSASCYLCILINLYDEENDTDMGFGRGA* | 1065 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 13695702 | 13699381 | + | Vvi9g802 | Vvi9g802 | 792513 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g802 | 1064 | Coils | Coil | 356 | 356 | - | - | |
Vvi9g802 | 1064 | MobiDBLite | consensus disorder prediction | 847 | 866 | - | - | |
Vvi9g802 | 1064 | Gene3D | Ribonuclease Inhibitor | 60 | 293 | IPR032675 | - | |
Vvi9g802 | 1064 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 73 | 1036 | - | - | |
Vvi9g802 | 1064 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 11 | 74 | - | - | |
Vvi9g802 | 1064 | SUPERFAMILY | L domain-like | 64 | 286 | - | - | |
Vvi9g802 | 1064 | MobiDBLite | consensus disorder prediction | 328 | 352 | - | - | |
Vvi9g802 | 1064 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 | 11 | 74 | - | - | |
Vvi9g802 | 1064 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 | 73 | 1036 | - | - | |
Vvi9g802 | 1064 | MobiDBLite | consensus disorder prediction | 867 | 979 | - | - | |
Vvi9g802 | 1064 | MobiDBLite | consensus disorder prediction | 817 | 1031 | - | - | |
Vvi9g802 | 1064 | MobiDBLite | consensus disorder prediction | 995 | 1030 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g802 | - | - | vvi:100265463 | 659.062 |