Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g803 ATGGATAAGAAGACCAGTTTCCTTAACAAGATCAAGAAGGCCACATGCCTAGACTCATCTACTCCAGACTCTGGAAAAGGGAAATGTAAATCATGTAGTAACATTGTTGCTCACGGATTCCACTTGGTAGAAGGGAAATCAGGTCATGATATGGAGGACTACCATGTTGCAGAATACAGAAATAAGAAGAGCCATGTACTTGGATTATTTGCCATCTTTGATGGCCATCTTGGTAACAGTGTGCCAAGTTATTTGAAAGATAACCTTTTCAATAATATACTTGAGGAGCCGAACTTCTGGAATGACCCCAAGATTGCAATAAAAAATGCATATCGTGCCACTGATAAATATATTCTGGAGAACTCCATGAAATTAGGTCCTGGTGGCTCAACGGCAGTAACTGCAATAGTTATTGATGGCAAAGACTTATGGGTAGCAAACATTGGTGACTCCAGAGCTGTCGTCTGTGAAAGGGGCGCTGCCAATCAGCTAACTGTTGACCATGAGCCAGACAGTGAACGAAGAAGAATTGAGAAACAAGGTGGCTTTGTGACTAATCTTGCTGGAGATGTGCCTCGAGTTAATGGCCAATTGGCAGTTGCACGTGCTTTTGGGGATCAAAGCCTTAAAGCACATTTAAGTTCGGAGCCTGATGTAAGACATGTGCCTATAGACTCAACTATAGAGTTTGTTATATTAGCAAGTGATGGCTTATGGAAGGTTATGAAAAACCAGGAGGCAGTTGATATGGTGAAATCCATTAAAGATCCTCAAGTAGCAGCCAAACGTCTAACAACAGAAGCATTGGAAAGAAAGAGCAAAGATGATATATCGTGCATCGTGATCCGTTTCGGATGA 858 41.72 MDKKTSFLNKIKKATCLDSSTPDSGKGKCKSCSNIVAHGFHLVEGKSGHDMEDYHVAEYRNKKSHVLGLFAIFDGHLGNSVPSYLKDNLFNNILEEPNFWNDPKIAIKNAYRATDKYILENSMKLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGAANQLTVDHEPDSERRRIEKQGGFVTNLAGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDSTIEFVILASDGLWKVMKNQEAVDMVKSIKDPQVAAKRLTTEALERKSKDDISCIVIRFG* 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13760555 13784958 - Vvi9g803 Vvi9g803 792514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g803 285 ProSiteProfiles PPM-type phosphatase domain profile. 37 284 IPR001932 -
Vvi9g803 285 PANTHER PROTEIN PHOSPHATASE 2C 44-RELATED 3 285 - -
Vvi9g803 285 CDD PP2Cc 51 284 IPR001932 -
Vvi9g803 285 Pfam Protein phosphatase 2C 49 277 IPR001932 -
Vvi9g803 285 SUPERFAMILY PP2C-like 30 285 IPR036457 -
Vvi9g803 285 PANTHER PROTEIN PHOSPHATASE 2C 3 285 IPR015655 GO:0004722|GO:0006470
Vvi9g803 285 SMART PP2C_4 33 282 IPR001932 -
Vvi9g803 285 Gene3D - 32 285 IPR036457 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g803 K17506 - vvi:100258467 575.859