Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g871 ATGCGCCGCTGTGATCTTCCTGCTCGTGATCTTCGCCTACTAGATCCACTGTTTGTTTACCCCTCAACAATTCTTGGTAGAGAGAAGGCTATTGTTGTAAATCTAGAGCAGATTCGATGTATTATCACAGCTGATGAGGTTCTGCTCTTGAACTCCCTTGATAGCTATGGTTGGCAAATGGAAGATGCTGACTTGAACCGAAGGAGAGGATGTAGCAATTTTGACAATGGGTTCGTGAACACATCACCTGATTACTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCTTGGAGGCAGCTTGCACATTTCTTGATGCTCAGGCAGCTGAATTAGAAATTGAAGCATATCCTCTGCTGGATGAACTTACATCAAAGATCAGTACCTTAAACTTGGAACGTGCACGTCGATTGAAAAGCAGACTTGTTGCTTTGACTCGAAGAGTTCAAAAGGTTAGGGATGAGATAGAGCAATTAATGGATGATGATGGAGACATGGCTGAAATGTATCTCACCGAGAAGAAAAGGCGGATGGAATCATCATTCTATGGTGAGCAGTCTTTGATGGGATACAGATCAATTGATGGTGCACTCTCTGTTTCTGCTCCAGTTTCTCCTGTTTCTTCACCTCCTGAGACACGGAGGCTTGAAAAAAGCTTAAGCGTCACAAGGAGCCGGCATGAAAGTATGAAGAGTTCAGAGAGTGCAACAGAGAGTATAGAAGAGTTGGAGATGTTGTTGGAAGCATATTTTGTTGTCATTGATAGCACCCTCAACAAGCTAACTTCGCTGAAGGAATACATTGATGACACAGAAGATTTCATTAACATTCAGCTGGATAATGTCCGAAACCAGCTGATCCAATTTGAGCTACTACTCACAACAGCAACTTTTGTTGTTGCCATCTTTGGGGTTGTAGCAGGCATATTTGGTATGAATTTTGAAATACCAATGTTCGATGACCCGGGTGCATTCAAGTGGGTTCTTATAATCACAGGAATATGTGGAATCATTATATTCTGTTCATTTGTGTGGTTTTTCAAATACAGAAGACTCATGCCGCTGTAG 1065 42.25 MRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYGWQMEDADLNRRRGCSNFDNGFVNTSPDYLPFEFRALEVALEAACTFLDAQAAELEIEAYPLLDELTSKISTLNLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMESSFYGEQSLMGYRSIDGALSVSAPVSPVSSPPETRRLEKSLSVTRSRHESMKSSESATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFDDPGAFKWVLIITGICGIIIFCSFVWFFKYRRLMPL* 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16818404 16826052 + Vvi9g871 Vvi9g871 792582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g871 354 Gene3D - 1 52 - -
Vvi9g871 354 Gene3D Magnesium transport protein CorA, transmembrane region 64 285 - -
Vvi9g871 354 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 353 IPR039204 -
Vvi9g871 354 CDD Mrs2_Mfm1p-like 1 351 IPR039204 -
Vvi9g871 354 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 1 353 - -
Vvi9g871 354 MobiDBLite consensus disorder prediction 216 235 - -
Vvi9g871 354 Coils Coil 134 161 - -
Vvi9g871 354 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 291 344 IPR045863 -
Vvi9g871 354 Pfam CorA-like Mg2+ transporter protein 222 345 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi9g871 354 MobiDBLite consensus disorder prediction 202 235 - -
Vvi9g871 354 Gene3D Magnesium transport protein CorA, transmembrane region 292 352 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g871 K16075 - vvi:100267379 647.121