Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g907 ATGCAAGGGTGGCGTACAACCATGGAAGATGCTCATGCAGCTTATCCGGATTTGGACAGTTCCACTTCTTTCTTTGCTGTTTACGATGGGCATGGAGGTAAGTGTGTTGCTAGGTTTTGCGCTAAGTACCTTCACGAACAGGTGCTGAAGAATGAAGCATGTTCAGCAGGAGATTTAGGTGGTTCTGTAAGGAAAGCTTTTCTCAGAATGGATGAAATGATGCGTGGAGAAAGAGGTTGGAGAGAATTAGCTAAGTTTGAAGATAGAGTAGACAGGTTTAGTCGTATCAATTATGATTCAATGTGCTCTCCAATGAGTGATGAATTTAATGATCAAAATGATGATTGGACTGAGGAGGGGCCTAACTATGATTTCCGTGGACCGAATTCGGGAAGCACTGCTTGCGTTGCTATCATTCGGGGTGACCAACTTCTTGTTGCAAATGCTGGTGATTCTCGTTGTGTACTGTCTAGGGCGGGTGAGGCATACGATTTGTCTACGGATCACAAGCCTGAGCTTCAGGAAGAGAAAGAAAGGATCCTAAAAGCTGGTGGTTGTATCCAACATGGACGGGTCAATGGAGTTTTAAACTTGGCAAGAGCAATTGGAGACAATGAATTCAAAATGAACAAATCTCTGCCTGCAGAAAAGCAAATGGTCACTGCCAATCCAGAGATAAACACTGCTTCTCTTTGCAATGATGATGATTTTATGGTTCTAGCTTGTGATGGGATCTGGGACTGCATGACAAGCCAAGAACTGGTGGAATTCGTACATGAACAGCTAAATTCAGGATGTAAGCTCTCAGCAGTGTGTGAAAAAGTGCTGGACAAGTGTTTAGCACCATCTTCTGGTGGCGAGGGATGTGACAACATGACTATGATCTTGGTGCAGTTCAAGAAACCTATTCACTCCAGTGCTTCTGCTGGGAAGCAGGAGCCTCTGCCTTCAGATATTCCATCCGGGTCTAATCAGGCACCAACGGGGACCAATTCATAG 999 44.74 MQGWRTTMEDAHAAYPDLDSSTSFFAVYDGHGGKCVARFCAKYLHEQVLKNEACSAGDLGGSVRKAFLRMDEMMRGERGWRELAKFEDRVDRFSRINYDSMCSPMSDEFNDQNDDWTEEGPNYDFRGPNSGSTACVAIIRGDQLLVANAGDSRCVLSRAGEAYDLSTDHKPELQEEKERILKAGGCIQHGRVNGVLNLARAIGDNEFKMNKSLPAEKQMVTANPEINTASLCNDDDFMVLACDGIWDCMTSQELVEFVHEQLNSGCKLSAVCEKVLDKCLAPSSGGEGCDNMTMILVQFKKPIHSSASAGKQEPLPSDIPSGSNQAPTGTNS* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17853038 17879949 + Vvi9g907 Vvi9g907 792618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g907 332 MobiDBLite consensus disorder prediction 305 332 - -
Vvi9g907 332 Pfam Protein phosphatase 2C 101 284 IPR001932 -
Vvi9g907 332 Pfam Protein phosphatase 2C 1 76 IPR001932 -
Vvi9g907 332 MobiDBLite consensus disorder prediction 317 332 - -
Vvi9g907 332 ProSitePatterns PPM-type phosphatase domain signature. 24 32 IPR000222 GO:0043169
Vvi9g907 332 ProSiteProfiles PPM-type phosphatase domain profile. 1 299 IPR001932 -
Vvi9g907 332 PANTHER PROTEIN PHOSPHATASE 2C 1 313 IPR015655 GO:0004722|GO:0006470
Vvi9g907 332 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 313 - -
Vvi9g907 332 CDD PP2Cc 1 299 IPR001932 -
Vvi9g907 332 SMART PP2C_SIG_2 7 299 IPR001932 -
Vvi9g907 332 SUPERFAMILY PP2C-like 1 300 IPR036457 -
Vvi9g907 332 Gene3D - 1 300 IPR036457 -
Vvi9g907 332 SMART PP2C_4 1 297 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g588 Vvi9g907 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g907 K17499 - vvi:100248342 681.789