Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g907 | ATGCAAGGGTGGCGTACAACCATGGAAGATGCTCATGCAGCTTATCCGGATTTGGACAGTTCCACTTCTTTCTTTGCTGTTTACGATGGGCATGGAGGTAAGTGTGTTGCTAGGTTTTGCGCTAAGTACCTTCACGAACAGGTGCTGAAGAATGAAGCATGTTCAGCAGGAGATTTAGGTGGTTCTGTAAGGAAAGCTTTTCTCAGAATGGATGAAATGATGCGTGGAGAAAGAGGTTGGAGAGAATTAGCTAAGTTTGAAGATAGAGTAGACAGGTTTAGTCGTATCAATTATGATTCAATGTGCTCTCCAATGAGTGATGAATTTAATGATCAAAATGATGATTGGACTGAGGAGGGGCCTAACTATGATTTCCGTGGACCGAATTCGGGAAGCACTGCTTGCGTTGCTATCATTCGGGGTGACCAACTTCTTGTTGCAAATGCTGGTGATTCTCGTTGTGTACTGTCTAGGGCGGGTGAGGCATACGATTTGTCTACGGATCACAAGCCTGAGCTTCAGGAAGAGAAAGAAAGGATCCTAAAAGCTGGTGGTTGTATCCAACATGGACGGGTCAATGGAGTTTTAAACTTGGCAAGAGCAATTGGAGACAATGAATTCAAAATGAACAAATCTCTGCCTGCAGAAAAGCAAATGGTCACTGCCAATCCAGAGATAAACACTGCTTCTCTTTGCAATGATGATGATTTTATGGTTCTAGCTTGTGATGGGATCTGGGACTGCATGACAAGCCAAGAACTGGTGGAATTCGTACATGAACAGCTAAATTCAGGATGTAAGCTCTCAGCAGTGTGTGAAAAAGTGCTGGACAAGTGTTTAGCACCATCTTCTGGTGGCGAGGGATGTGACAACATGACTATGATCTTGGTGCAGTTCAAGAAACCTATTCACTCCAGTGCTTCTGCTGGGAAGCAGGAGCCTCTGCCTTCAGATATTCCATCCGGGTCTAATCAGGCACCAACGGGGACCAATTCATAG | 999 | 44.74 | MQGWRTTMEDAHAAYPDLDSSTSFFAVYDGHGGKCVARFCAKYLHEQVLKNEACSAGDLGGSVRKAFLRMDEMMRGERGWRELAKFEDRVDRFSRINYDSMCSPMSDEFNDQNDDWTEEGPNYDFRGPNSGSTACVAIIRGDQLLVANAGDSRCVLSRAGEAYDLSTDHKPELQEEKERILKAGGCIQHGRVNGVLNLARAIGDNEFKMNKSLPAEKQMVTANPEINTASLCNDDDFMVLACDGIWDCMTSQELVEFVHEQLNSGCKLSAVCEKVLDKCLAPSSGGEGCDNMTMILVQFKKPIHSSASAGKQEPLPSDIPSGSNQAPTGTNS* | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 17853038 | 17879949 | + | Vvi9g907 | Vvi9g907 | 792618 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g907 | 332 | MobiDBLite | consensus disorder prediction | 305 | 332 | - | - | |
Vvi9g907 | 332 | Pfam | Protein phosphatase 2C | 101 | 284 | IPR001932 | - | |
Vvi9g907 | 332 | Pfam | Protein phosphatase 2C | 1 | 76 | IPR001932 | - | |
Vvi9g907 | 332 | MobiDBLite | consensus disorder prediction | 317 | 332 | - | - | |
Vvi9g907 | 332 | ProSitePatterns | PPM-type phosphatase domain signature. | 24 | 32 | IPR000222 | GO:0043169 | |
Vvi9g907 | 332 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 299 | IPR001932 | - | |
Vvi9g907 | 332 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 313 | IPR015655 | GO:0004722|GO:0006470 | |
Vvi9g907 | 332 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 313 | - | - | |
Vvi9g907 | 332 | CDD | PP2Cc | 1 | 299 | IPR001932 | - | |
Vvi9g907 | 332 | SMART | PP2C_SIG_2 | 7 | 299 | IPR001932 | - | |
Vvi9g907 | 332 | SUPERFAMILY | PP2C-like | 1 | 300 | IPR036457 | - | |
Vvi9g907 | 332 | Gene3D | - | 1 | 300 | IPR036457 | - | |
Vvi9g907 | 332 | SMART | PP2C_4 | 1 | 297 | IPR001932 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g907 | K17499 | - | vvi:100248342 | 681.789 |