Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g957 ATGGGTTCCATTGAGGAGAAGATAGACCTTGAATCAGATGAGGAGATCCCTTTTAGCACATCACAAGGCACAAGAAAAGTTCATTCTTTTGACTTCGAGACATCTCATATTGGGTCTCATGCAGCTCTCTCCACCTCATGGATCTTTAAAAAAATGAGGACTGCTCCTCTAAGAAGTGTTTACATTGTCTTGATTAAAGCGAAGATAAATATGTTGCTACCTTTTGGTCCCTTAGCAATTTTCCTACATTATCTTACTGGAAAGCATGGATGGGTCTTCTTCTTCAGCTTATTAGGTATTACCCCTTTAGCCGAGCGTTTGGGTTTTGCCACCGAGCAGCTTGCATTCTACACAGGCGCTACAGTTGGGGGTCTTCTAAATGCTACCTTTGGCAATGCGACAGAAATGATAATTTCAATGTATGCATTGAAGCATGGGATGATAAGAGTTGTTCAGCAATCATTATTGGGCTCCATCTTGTCAAACATGCTTTTGGTTCTTGGATGCGCATTCTTCACTGGCGGGATAAAAAATCACACAAAAGTTCAGGAGTTCAATAAGGCAGCTGCCTTGGTGAACTCAGGATTATTGCTTATGGCTGTTATGGGTTTAATGTTTCCAGCGGTGCTTCACTTCACACACACAGAGGTGCACTTTGGGAAATCAGAATTAGCTCTTTCAAGATTTAGCAGCTGTATAATGCTTGTGGCATACGCCAGCTACCTTTTCTTTCAGCTTAAAAGTCAACCGAATCTTTATAGTCCCATTGATGAGGACACAGAAAAAATTGAAGAAGATTCTGATGAAGACATTCCAGAACTAACTCAATGGGAAGCAATTAGCTGGCTTGCTATTCTCACTCTATGGGTGTCTGTACTCTCTGGATACCTTGTTGATGCTATAGAGGGAGCATCTGAGTCATTAAACATGCCAGTGGCTTTTATTAGTGTCATTCTGCTTCCAATTGTAGGAAATGCTGCTGAGCATGCCAGTGCAATTATGTTTGCCATAAAGAACAAGCTTGACATCACAATCGGAGTTGCAATTGGTTCATCTACACAAATAGCAATGTTTGTGATTCCCTTCTGTGTGGTTGTTGGTTGGATTATGGGACAACCAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACTCTCTTTATCGCGGTGCTAGTAGTGGCATTTATGTTGCAGGAAGGGACATCAAACTATTTTAAAGGTTTGATGCTTATTCTATGCTATCTCATAGTTGCAGCCAGCTTTTTTGTACATGTTGACCCTACAAAGGATAATGATTAA 1299 40.88 MGSIEEKIDLESDEEIPFSTSQGTRKVHSFDFETSHIGSHAALSTSWIFKKMRTAPLRSVYIVLIKAKINMLLPFGPLAIFLHYLTGKHGWVFFFSLLGITPLAERLGFATEQLAFYTGATVGGLLNATFGNATEMIISMYALKHGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIKNHTKVQEFNKAAALVNSGLLLMAVMGLMFPAVLHFTHTEVHFGKSELALSRFSSCIMLVAYASYLFFQLKSQPNLYSPIDEDTEKIEEDSDEDIPELTQWEAISWLAILTLWVSVLSGYLVDAIEGASESLNMPVAFISVILLPIVGNAAEHASAIMFAIKNKLDITIGVAIGSSTQIAMFVIPFCVVVGWIMGQPMDLNFQLFETATLFIAVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTKDND* 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19317142 19330227 - Vvi9g957 Vvi9g957 792668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g957 432 Gene3D - 268 423 IPR044880 -
Vvi9g957 432 Gene3D - 119 263 IPR044880 -
Vvi9g957 432 TIGRFAM cax: calcium/proton exchanger 72 422 IPR004798 GO:0006816|GO:0015369
Vvi9g957 432 Pfam Sodium/calcium exchanger protein 91 246 IPR004837 GO:0016021|GO:0055085
Vvi9g957 432 Pfam Sodium/calcium exchanger protein 282 419 IPR004837 GO:0016021|GO:0055085
Vvi9g957 432 TIGRFAM caca2: calcium/proton exchanger 63 422 - -
Vvi9g957 432 PANTHER VACUOLAR CATION/PROTON EXCHANGER 1 431 - -
Vvi9g957 432 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g957 K07300 - vvi:100253555 848.58