Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g969 ATGGTTCTTGTTCAGATTCCAATGTGCAATGAGAGAGAGGTTTATGAACAATCGATATCAGCAGTGTGCCAACTTGATTGGCCAAAAGACCGACTATTGATCCAAGTTCTTGATGACTCTGACGATGAGAGCATACAGTGGTTGATTAAGGGAGAGGTGTCTAAGTGGAGTCAAAAGGGCATCAACATAATTTATCGGCATCGACTGGTTAGAACCGGTTATAAAGCTGGTAATCTCAAGTCTGCTATGAATTGTGATTATGTGAAGGCGTATGAATTTGTTGCAATCTTTGATGCTGACTTCCAGCCAAACCCAGATTTCCTTATGCAAACAGTTCCACATTTTAAGGATAATCCTGAGCTGGGATTGGTTCAGGCTAGGTGGGCTTTTGTGAACAAGGATGAAAATTTGTTGACTCGCCTCCAAAACATCAATTTGTGCTTTCATTTTGAGGTGGAACAGCAGGTCAATGGAGTCTTCATAAATTTCTTTGGCTTCAATGGGACTGCTGGTGTTTGGAGAATCAAAACACTTGAGGACTCTGGTGGCTGGCTTGAGAGGACAACCGTAGAGGATATGGATATAGCAGTCCGAGCCCATCTCAATGGATGGAAGTTCATCTTCCTTAATGATGTGAAGGTCCTCTGTGAAGTTCCCGAGTCTTATGAAGCTTACAGGAAGCAGCAACACCGATGGCATTCCGGTCCAATGCATCTTTTCCGTCTGTGCCTTCCAGCCATCATAACTTCTAAGGTAGCAGTCTGGAAGAAAGCGAACCTAATACTACTATTCTTTCTTCTGAGGAAGCTTATCCTCCCATTCTATTCTTTCACATTGTTTTGCATAATTCTTCCTTTAACCATGTTTGTCCCCGAAGCCGAGTTACCTGTCTGGGTTATCTGTTATGTCCCTGTATTCATGTCATTCCTAAACATTCTTCCAGCCCCGAGATCATTCCCCTTCATTGTTCCATACCTCCTATTTGAAAACACAATGTCTGTGACCAAATTCAATGCTATGGTATCTGGGTTGTTCCAATTGGGAAGCTCATATGAATGGGTTGTCACCAAAAAGGCAGGGCGAGCATCAGAGCCTGACCTATTGGCTGCTGCAGAGAGGGAAACAAAAGCCATGAATCATCCACAGCTTTATAGAGGATCTTCTGATAAGCTTGCACTGGCTTTCTTGCTACTAACTGCCGCTGTCAGAAGCCTGCTATCAGCCCAAGGAGTGCACTTCTACTTCTTGCTGTTCCAAGGTGTGTCATTCCTCCTTGTGGGTCTAGATCTAATTGGTGAACAGATGAGCTAA 1311 43.71 MVLVQIPMCNEREVYEQSISAVCQLDWPKDRLLIQVLDDSDDESIQWLIKGEVSKWSQKGINIIYRHRLVRTGYKAGNLKSAMNCDYVKAYEFVAIFDADFQPNPDFLMQTVPHFKDNPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFINFFGFNGTAGVWRIKTLEDSGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCLPAIITSKVAVWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSFLNILPAPRSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRASEPDLLAAAERETKAMNHPQLYRGSSDKLALAFLLLTAAVRSLLSAQGVHFYFLLFQGVSFLLVGLDLIGEQMS* 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19558983 19561872 + Vvi9g969 Vvi9g969 792680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g969 436 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 219 IPR029044 -
Vvi9g969 436 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 2-RELATED 390 436 - -
Vvi9g969 436 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 2-RELATED 1 389 - -
Vvi9g969 436 PANTHER - 390 436 - -
Vvi9g969 436 PANTHER - 1 389 - -
Vvi9g969 436 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 302 IPR029044 -
Vvi9g969 436 Pfam Glycosyl transferase family group 2 94 300 IPR001173 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g659 Vvi9g969 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g969 - - vvi:100265643 843.958