Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g974 ATGGCTGAGGTAGACAGCTTTCAGAATCTGCTAGCTGCAAGGATGTTTTTGAAAACAAGCCTAGAGAAATCAAGAACTGTAGCTTCTGGCCTGGAGAAAACCGGCCCCAGGTTGGAGGAGATTAAGCAAAGACTGTCATCATTGGAAGCTGCGGTTCGGCCTCTTCGGGCACAGAAATGTAGTCTTGCTGCAGTTGGGGGCCATATCAGCCGCGCAGTTGGCCCTGCTGCTGCAGTTCTGAAGGTGTTTGATGCCATCCATGGGCTGGAGAAGTCGCTTTCGTCTGACCCGACTTCAGACCTCTATGGGTACCTCTTAGTCGTTAAAAGGCTGGAGGAGGCCTTGAGGTTTCTGGCTGAGAATTGTGGATTGGCAATAAGGTGGTTGGAGGATGTGGTTGAGTTCTTGAAAGATAATGGCGTCACGGATGATCACCGGTACCTCTCCAATGTGACTAAATCTTTGAACATCCTCAGGGAGTTGCAGGCAAGCGAAGAACGTGCCCGTCTCGATGGAGGGCTTCTCAGTGCTGCATACGACAAGCTGGAAACCGAATACAGACGGCTTTTGGGAGAAAATGGTGTTCCTCTTCCCATCATTTCCTCGTCATCTTCCATTATATCTATCTTCGAGTTCGATAACTTTCTGAACATGGAGAGTTCCGTAGATCTGTGGAGCAAGCATTTAGAGTATGCTGTGAAGAATCTGCTGGAGCTCGAGTACCAGCTCTGCAACGACGTTTTTGAGAAGATCGGGTCGGATGTTTCAATGGATTGCTTTGCAAGGATTGCTATCCAGTCCGGATTTCTGGCTTTCATTCAGTTTGGGAACACTGTCACAGAGAGTAAGAAAGATGCAGTCAAGCTCTTTAAACTATTGAAAATCTTCCATACTTTGAATGAACTGAGATTGGATTTCAACCGCCTGTTCGGGGGAAAATCTTGCATTGAAATTCGAATCCCAACCAGGCATCTCATCAAGAGGGTGATCGATGGTGCTTGTGAGATATTTTGGGAGCTTTTGCCGCAGGTGGAGGCTCATAAGGGGACTTCTCCTCCTTCCAATGGCAGTGTTCCAAGTCTGGTGAGCTTCGTCGTTGACTACTGTAACCAGCTGCTCCAGGATGATTACAGGCCAACCATGATACAGGTTCTGGAGATTCACCAGAACTGGAAACACCAAAAATTTCAAGAAGAACTCTTGAGGAAGGAGGTCCGCAACATTGTGGAGGCGGTTCAGCGGAACCTGGATGCCTGGTCCAAGGCCTATGAGGACACCTCACTGTCCTACATTTTCTTGATGAACAATCACTGTCACTTGTACAAGGCCCTCAAGGGGACAAGCCTTGGGAACCTCATAGGTGACTCTCAGTTGAAAGAACACAAAAAGAACAAGGACTATTACGCGTCGATCTACTTGAGGGAGAGTTGGGGAATGCTTCCAGGCCTTTTAGGCCATGAGGATGAGACCTTGTTCTCAGGTGGAAGGGCCATGGCCTGCAGTCTGGTGAAGAAGAAGCTGAAGGCATTCAATGAGGCCTTGGATGGAACCTATAAGAAGCAATCGAACTGGGACGTGGCCGACGAAAACCTCAGGAAGAGGATATGCCAGCTTGTGGTTGATGCCATTGTGCCTGTATATAGGAGCTACATTCAGAAATATGGGCATTTTATTGAACAAGATGGCATTAAGAATGTGAAAATTTACTCTGAAGAGGGTTTGGTGAGTATGCTGAGCTCAATGTTTCAGCCAAAGAAGGGGAAGTGTTATAGCATTAATACCAGGCACTCCATTGATAAAATGAGTGAGATTGTCACCAGTCGGTTTCCCTCTACTACTGTTGTAGCATGA 1851 47.38 MAEVDSFQNLLAARMFLKTSLEKSRTVASGLEKTGPRLEEIKQRLSSLEAAVRPLRAQKCSLAAVGGHISRAVGPAAAVLKVFDAIHGLEKSLSSDPTSDLYGYLLVVKRLEEALRFLAENCGLAIRWLEDVVEFLKDNGVTDDHRYLSNVTKSLNILRELQASEERARLDGGLLSAAYDKLETEYRRLLGENGVPLPIISSSSSIISIFEFDNFLNMESSVDLWSKHLEYAVKNLLELEYQLCNDVFEKIGSDVSMDCFARIAIQSGFLAFIQFGNTVTESKKDAVKLFKLLKIFHTLNELRLDFNRLFGGKSCIEIRIPTRHLIKRVIDGACEIFWELLPQVEAHKGTSPPSNGSVPSLVSFVVDYCNQLLQDDYRPTMIQVLEIHQNWKHQKFQEELLRKEVRNIVEAVQRNLDAWSKAYEDTSLSYIFLMNNHCHLYKALKGTSLGNLIGDSQLKEHKKNKDYYASIYLRESWGMLPGLLGHEDETLFSGGRAMACSLVKKKLKAFNEALDGTYKKQSNWDVADENLRKRICQLVVDAIVPVYRSYIQKYGHFIEQDGIKNVKIYSEEGLVSMLSSMFQPKKGKCYSINTRHSIDKMSEIVTSRFPSTTVVA* 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19633643 19635659 + Vvi9g974 Vvi9g974 792685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g974 616 Pfam Exo70 exocyst complex subunit 225 579 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi9g974 616 SUPERFAMILY Cullin repeat-like 79 582 IPR016159 -
Vvi9g974 616 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 204 IPR004140 GO:0000145|GO:0006887
Vvi9g974 616 PANTHER EXOCYST COMPLEX PROTEIN EXO70 214 587 IPR004140 GO:0000145|GO:0006887
Vvi9g974 616 Coils Coil 38 58 - -
Vvi9g974 616 Gene3D Exocyst complex component Exo70 77 589 - -
Vvi9g974 616 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 214 587 - -
Vvi9g974 616 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 204 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g196 Vvi9g974 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g974 K07195 - vvi:100262054 1090.49