Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g976 ATGGCTGAGGTAGACAGCTTTCAGAATCTGCTAGCTGCAAGGATGTTACTGAAAACTAGCCTAGAGAAATCAAGAAGTGTAGCTTCTGCCCTGGAGAAAACTGGCCCCAGGTTGGAGGAGATTAAGCAAAGTCTGCCATCATTGGAAGCTGCTCTTCGGGCACAGAAATGCAGTCTTGCTGCACTTGGGGGCCATATCAGCCGCGCAGTTGGCCCTGCTGCTGCAGTTCTGAAGGTGTTTGATGCCATCCATGGCCTAGAAAAGTCACTTTCATCTGACCCGAGTTCGGACCTCTATGGCTACCTCGTAGTCGTTAAAAGGCTCGAGGAGGCCTTGAGGTTTCTGGCTGAGAATTGTGGATTGGCAATAAGATGGTTGGAGGATGTGGTCGAGTTCTTGAAAGAAAATGCAGTCACCGATGATCACCGGTACCTCTCCAATGTGACTAAATCTTTGAAGATCCTCAGGGAGTTGCAGGCAAATGAGGAATGCGCCCGTCTCGATGGAGGGCTTCTCAGTGCTGCATACGACAAGCTGGAAACCGAATACAGACGGCTTTTGAGAGAAAATGGTGTTCCTCTCCCCATCATTTCCTCAGCATCCTCCATTGTTGCTCCATCATCTTTACCAGTTTTTGTTATTCAGAAGTTGCAGGTCATTATTGAGAGGTTAAGTGCTAATAATAGACTTGAAAACTGTCTTTCTACTTACATAGACATTCGTAGTTCAAATGCCAGAGCATGTTTAGAAGCTCTTGGTTTGGACTACCTCGAGATATCTATCTTTGAGTTCGATAATTTGCAGTACATGGAGAGTTCCCTAGATATGTGGAGCAAGCATTTAGAATATTCTGTGAAGAATCTGCTGGAGCTCGAGTATCAGCTGTGCAACGACGTATTCGAGAAGGTTGGATTGGATGTTTCAATGGATTGCTTTGCAAAGATTGCTATCCAGTCCGGATTTCTGGCTTTCATCCAATTTGGGAACACTGTCACAGAGAGTAAGAAAGATGCAGTCAAGCTCTTTAAACTATTGAAAATCTTCCATACTTTGAATGAACTGAGATTGGATTTCAACCGCCTATTTGGGGGAAAATCTTGCAATGAAATTCAAATCCCAACGAGGCATCTCATCAAGAGGGTGATTGATGGTGCTTGTGAGATATTTTGGGAGCTTTTGCCGCAGGTGGAGGTTCATAGGGGGACTTCTCCTCCTTCCAATGGCAGTGTTCCGAGTCTGGTGAGCTTCGTCATTGACTACTGTAACCAGCTGCTCGAGGATGATTACAGGCTAACCATGATACAGGTTCTGGAGATTCACCAGAACTGGAAACACCAAAAATTTCAAGAGGAACTCTTGAGGAAGGAGGTCTGCAACATTGTGGAGGCTATTCGGCTGAACCTGGATGCCTGGTCCAAGTCCTATGAGGACACTCCACTGTCCTACATTTTCTTGATGAACAATCACTGTCACTTGTACAAGGCCCTCAAGGGGACAAGCCTTGGGGACCTCATAGGTGACTTTCAGTTGAGAGAACACAAAAAGTATAGGGACTATTACGCATCGATCTACTTGAGGGATAGTTGGGGAATGCTTCCAGGCCTTTTAGGCCATGAAGATGAGACCTTATTCTCAGATGGAAGGGCCATGGCCTGCAGTCTGGTGAAGAAGAAGCTGAAGACATTCAATGAGGCCTTGGATGGAACCTATAAGAAGCAATCGAACTGGGTCCTGGCCAACAAAAACCTCAGGAAGAGGATATGCCAGCTTGTGGTTGATGCCATTGTGCCTGTATATAGGAGCTACATTCAGAAATATGGGCATTTTATTGAACAAGACGGCATTAAGAATGTGAAAATTTACACTGAAGAGGGTTTGGTGAATATGCTGAGCTCAATGTTTCAGCCAAAGATGGGGAAGTGTTATAGCACTAATACCAGGCACTCCATTGATAAAAAGAGTGAGATTGTCACCAGTCAGTTTCCCTCTACTACTGTTGTAGCATGA 2007 45.29 MAEVDSFQNLLAARMLLKTSLEKSRSVASALEKTGPRLEEIKQSLPSLEAALRAQKCSLAALGGHISRAVGPAAAVLKVFDAIHGLEKSLSSDPSSDLYGYLVVVKRLEEALRFLAENCGLAIRWLEDVVEFLKENAVTDDHRYLSNVTKSLKILRELQANEECARLDGGLLSAAYDKLETEYRRLLRENGVPLPIISSASSIVAPSSLPVFVIQKLQVIIERLSANNRLENCLSTYIDIRSSNARACLEALGLDYLEISIFEFDNLQYMESSLDMWSKHLEYSVKNLLELEYQLCNDVFEKVGLDVSMDCFAKIAIQSGFLAFIQFGNTVTESKKDAVKLFKLLKIFHTLNELRLDFNRLFGGKSCNEIQIPTRHLIKRVIDGACEIFWELLPQVEVHRGTSPPSNGSVPSLVSFVIDYCNQLLEDDYRLTMIQVLEIHQNWKHQKFQEELLRKEVCNIVEAIRLNLDAWSKSYEDTPLSYIFLMNNHCHLYKALKGTSLGDLIGDFQLREHKKYRDYYASIYLRDSWGMLPGLLGHEDETLFSDGRAMACSLVKKKLKTFNEALDGTYKKQSNWVLANKNLRKRICQLVVDAIVPVYRSYIQKYGHFIEQDGIKNVKIYTEEGLVNMLSSMFQPKMGKCYSTNTRHSIDKKSEIVTSQFPSTTVVA* 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19674806 19676813 + Vvi9g976 Vvi9g976 792687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g976 668 SUPERFAMILY Cullin repeat-like 76 634 IPR016159 -
Vvi9g976 668 Pfam Exo70 exocyst complex subunit 277 631 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi9g976 668 Gene3D Exocyst complex component Exo70 124 640 - -
Vvi9g976 668 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 639 - -
Vvi9g976 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 639 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g196 Vvi9g976 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g976 K07195 - vvi:100241555 1314.67