Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g99 ATGATGATGAGTGCAAGAAACAGGTCTCCTTTCACAGCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTTCAAATATATAGTGTCAGGAGTACCAATCCCAGCTGATCTCATCTGCACTGTCAAAAGAAGCTTGGACTCTTCATTGTCTTCAAGGCTATTTCCTCACCAACCCATTGGGTGGGGTTGTTTTCAGATGGGGTTTGGCAGGAAAGCAGACCCAGAGCCAGGAAGGTGCAGAAGAACTGATGGCAAGAAATGGAGGTGCTCCAAAGAAGCATACCCAGATTCAAAATACTGTGAGAGACACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTATTTCAGCTACAAACCCTTCACCAACCATCTCATCAATCAACTCAAATCCTTCCTCCACCACCACCAATTCTTACTCTCTCTCTCCTCTCTCTCCTCTCTCTTCTTCAATGACTTCTGAAACCTCCCATCCCCATCACCATTCCTACCACAACACCTCTCTTTATCCCTTCCTCTACCCTCATCCCTCCTCTTCTAGACCTCCTGGTTCTTGCCTATCACCTCAGGCCACCAGCAGTTACAGCACCCATCATCTGTTTTTGGACTCTGGGTCTTATTCCCAGGCTGATAGGGATTACAGGCATCATCATGGAATGAGGGAGGGTGTGGATGAGAGAGCTTTCTTCCCAGAAGCTTCAGGGACTGTAAGGGGCCTACATGATTCATATACTCCATTAACAATGAGTTCCTCCAAGGGATACTCTCACTTTCAGTATCAAAGCCCCGCTGATAATCCCAAACAGCAGCAAGAACAGCAAGAGCAGCAGCACTGCTTTGTCTTGGGCACTGATTTCAAATCGTCAAGGCCAATTAAAGTAGAGAGAGATGGTGAAGCCCAGAAGCCTCTCCACCATTTCTTTGGAGAGTGGCCTCTAAAGAACAGAGACTCCTGGCTTGACCTTGAGGAGGATCCACCAACCCATGCATCATTCTCCACCACCCAGCTCTCAATTTCAATCCCAATGTCCTCACACAAGCTTCTTGCATCGGATTCCAGAATCCAAACTGATGGATGA 1092 47.16 MMMSARNRSPFTASQWQELEHQALIFKYIVSGVPIPADLICTVKRSLDSSLSSRLFPHQPIGWGCFQMGFGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVISATNPSPTISSINSNPSSTTTNSYSLSPLSPLSSSMTSETSHPHHHSYHNTSLYPFLYPHPSSSRPPGSCLSPQATSSYSTHHLFLDSGSYSQADRDYRHHHGMREGVDERAFFPEASGTVRGLHDSYTPLTMSSSKGYSHFQYQSPADNPKQQQEQQEQQHCFVLGTDFKSSRPIKVERDGEAQKPLHHFFGEWPLKNRDSWLDLEEDPPTHASFSTTQLSISIPMSSHKLLASDSRIQTDG* 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1135207 1137036 + Vvi9g99 Vvi9g99 791810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g99 363 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vvi9g99 363 Pfam QLQ 10 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vvi9g99 363 PANTHER GROWTH-REGULATING FACTOR 5 4 354 - -
Vvi9g99 363 Pfam WRC 76 118 IPR014977 -
Vvi9g99 363 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vvi9g99 363 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Vvi9g99 363 PANTHER - 4 354 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vvi9g99 363 MobiDBLite consensus disorder prediction 117 161 - -
Vvi9g99 363 MobiDBLite consensus disorder prediction 105 168 - -
Vvi9g99 363 MobiDBLite consensus disorder prediction 259 279 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g99 Vvi11g90 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15255 PF08879 WRC 7.60E-21 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g99 - - vvi:100247998 664.07