Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01497 | ATGCCAGGTGGGTCTTCATCATCCACATTTTCCCACCTCATCGGAGAATCTTCCGCCGGAGTTGACAGAAGACGATCATCTGAAGCTATACACAATGGCGTTAATTTTCCACATCTTCTTCGTCAAGAATCGCTTGGCCAACAAAGAGATGTTGTTCCCGATCGAGTGGCTTCACCGGAGGAGAATTTCGGTTCGTTTACCGGTAGATCTAAACCGAGGAACTCACCTGCTGGAATTACTAGATACCGGGAATGTCTAAAAAACCATGCCGCGAATGTTGGTGGGAACATTTACGACGGCTGCGGAGAGTTCATGCCGAACGGCGAAGACGGAACCCTAGAAGCCTTGAAATGCGCCGCCTGCGACTGCCACCGTAATTTCCACCGCAAAGAAGTGGACGGCGAGACGCAATTGATCAGTCCGACCTCGAGAAGAACCATTGTCCTCAATCACCTCCAGCTTCCACCGCCATTGCCGTCTCCCCACCACCATAAATTCTCAATGGGCCTGAATTTCCACTCAAGCCCTACCGCTCCGATCGTGGCGCCAATGAACGTCGCATTCGGCGGAAACGAATCCTCAAGCGAAGATTTAAATGTCTTCCATTCCAATGCCGAAGGGGTTCCACACCCACCATTTTCACTCTCGAAGAAAAGGTTCAGAACCAAGTTCACTCAGGAACAGAAGAATAGAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGCAAAAGCAAAACGAAGAAGAAGTAGACAAGTTCTGCGCAGAAGTAGGAGTAAAGAGACAAGTTCTAAAGGTATGGATGCACAATAACAAAACGACCACCATGAAAAAGCAAAGCGAGAATCATGATCAGACGTTGGAGATCACAGGAGCAGCCGACGAAAGAGATTAG | 897 | 48.83 | MPGGSSSSTFSHLIGESSAGVDRRRSSEAIHNGVNFPHLLRQESLGQQRDVVPDRVASPEENFGSFTGRSKPRNSPAGITRYRECLKNHAANVGGNIYDGCGEFMPNGEDGTLEALKCAACDCHRNFHRKEVDGETQLISPTSRRTIVLNHLQLPPPLPSPHHHKFSMGLNFHSSPTAPIVAPMNVAFGGNESSSEDLNVFHSNAEGVPHPPFSLSKKRFRTKFTQEQKNRMLEFAEKVGWRMQKQNEEEVDKFCAEVGVKRQVLKVWMHNNKTTTMKKQSENHDQTLEITGAADERD | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 50842309 | 50843205 | + | Bda003753.1 | Bda01g01497 | 1497 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01497 | 298 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 217 | 273 | IPR006455 | - | |
Bda01g01497 | 298 | SUPERFAMILY | Homeodomain-like | 213 | 276 | IPR009057 | - | |
Bda01g01497 | 298 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Bda01g01497 | 298 | Pfam | ZF-HD protein dimerisation region | 80 | 132 | IPR006456 | - | |
Bda01g01497 | 298 | MobiDBLite | consensus disorder prediction | 277 | 298 | - | - | |
Bda01g01497 | 298 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 82 | 131 | IPR006456 | - | |
Bda01g01497 | 298 | Gene3D | - | 209 | 278 | - | - | |
Bda01g01497 | 298 | MobiDBLite | consensus disorder prediction | 275 | 298 | - | - | |
Bda01g01497 | 298 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Bda01g01497 | 298 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 5 | 48 | 280 | - | - | |
Bda01g01497 | 298 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 81 | 132 | IPR006456 | - | |
Bda01g01497 | 298 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 48 | 280 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01497 | Bda08g01280 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01497 | Bda-Chr1:50842309 | Bda11g01865 | Bda-Chr11:53736302 | 1.14E-67 | dispersed | |
Bda06g00545 | Bda-Chr6:7721829 | Bda01g01497 | Bda-Chr1:50842309 | 1.84E-19 | dispersed | |
Bda06g00184 | Bda-Chr6:2514767 | Bda01g01497 | Bda-Chr1:50842309 | 4.90E-58 | transposed | |
Bda01g01497 | Bda-Chr1:50842309 | Bda14g01007 | Bda-Chr14:8472491 | 6.55E-64 | wgd | |
Bda01g01497 | Bda-Chr1:50842309 | Bda04g00124 | Bda-Chr4:2892638 | 3.24E-55 | wgd | |
Bda01g01497 | Bda-Chr1:50842309 | Bda08g01280 | Bda-Chr8:52070127 | 4.05E-113 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15452 | PF04770 | ZF-HD_dimer | 2.50E-29 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01497 | - | - | csv:101216040 | 363.229 |