Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01497 ATGCCAGGTGGGTCTTCATCATCCACATTTTCCCACCTCATCGGAGAATCTTCCGCCGGAGTTGACAGAAGACGATCATCTGAAGCTATACACAATGGCGTTAATTTTCCACATCTTCTTCGTCAAGAATCGCTTGGCCAACAAAGAGATGTTGTTCCCGATCGAGTGGCTTCACCGGAGGAGAATTTCGGTTCGTTTACCGGTAGATCTAAACCGAGGAACTCACCTGCTGGAATTACTAGATACCGGGAATGTCTAAAAAACCATGCCGCGAATGTTGGTGGGAACATTTACGACGGCTGCGGAGAGTTCATGCCGAACGGCGAAGACGGAACCCTAGAAGCCTTGAAATGCGCCGCCTGCGACTGCCACCGTAATTTCCACCGCAAAGAAGTGGACGGCGAGACGCAATTGATCAGTCCGACCTCGAGAAGAACCATTGTCCTCAATCACCTCCAGCTTCCACCGCCATTGCCGTCTCCCCACCACCATAAATTCTCAATGGGCCTGAATTTCCACTCAAGCCCTACCGCTCCGATCGTGGCGCCAATGAACGTCGCATTCGGCGGAAACGAATCCTCAAGCGAAGATTTAAATGTCTTCCATTCCAATGCCGAAGGGGTTCCACACCCACCATTTTCACTCTCGAAGAAAAGGTTCAGAACCAAGTTCACTCAGGAACAGAAGAATAGAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGCAAAAGCAAAACGAAGAAGAAGTAGACAAGTTCTGCGCAGAAGTAGGAGTAAAGAGACAAGTTCTAAAGGTATGGATGCACAATAACAAAACGACCACCATGAAAAAGCAAAGCGAGAATCATGATCAGACGTTGGAGATCACAGGAGCAGCCGACGAAAGAGATTAG 897 48.83 MPGGSSSSTFSHLIGESSAGVDRRRSSEAIHNGVNFPHLLRQESLGQQRDVVPDRVASPEENFGSFTGRSKPRNSPAGITRYRECLKNHAANVGGNIYDGCGEFMPNGEDGTLEALKCAACDCHRNFHRKEVDGETQLISPTSRRTIVLNHLQLPPPLPSPHHHKFSMGLNFHSSPTAPIVAPMNVAFGGNESSSEDLNVFHSNAEGVPHPPFSLSKKRFRTKFTQEQKNRMLEFAEKVGWRMQKQNEEEVDKFCAEVGVKRQVLKVWMHNNKTTTMKKQSENHDQTLEITGAADERD 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 50842309 50843205 + Bda003753.1 Bda01g01497 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01497 298 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 217 273 IPR006455 -
Bda01g01497 298 SUPERFAMILY Homeodomain-like 213 276 IPR009057 -
Bda01g01497 298 MobiDBLite consensus disorder prediction 1 15 - -
Bda01g01497 298 Pfam ZF-HD protein dimerisation region 80 132 IPR006456 -
Bda01g01497 298 MobiDBLite consensus disorder prediction 277 298 - -
Bda01g01497 298 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 82 131 IPR006456 -
Bda01g01497 298 Gene3D - 209 278 - -
Bda01g01497 298 MobiDBLite consensus disorder prediction 275 298 - -
Bda01g01497 298 MobiDBLite consensus disorder prediction 1 76 - -
Bda01g01497 298 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 48 280 - -
Bda01g01497 298 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 81 132 IPR006456 -
Bda01g01497 298 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 280 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01497 Bda08g01280 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01497 Bda-Chr1:50842309 Bda11g01865 Bda-Chr11:53736302 1.14E-67 dispersed
Bda06g00545 Bda-Chr6:7721829 Bda01g01497 Bda-Chr1:50842309 1.84E-19 dispersed
Bda06g00184 Bda-Chr6:2514767 Bda01g01497 Bda-Chr1:50842309 4.90E-58 transposed
Bda01g01497 Bda-Chr1:50842309 Bda14g01007 Bda-Chr14:8472491 6.55E-64 wgd
Bda01g01497 Bda-Chr1:50842309 Bda04g00124 Bda-Chr4:2892638 3.24E-55 wgd
Bda01g01497 Bda-Chr1:50842309 Bda08g01280 Bda-Chr8:52070127 4.05E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15452 PF04770 ZF-HD_dimer 2.50E-29 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01497 - - csv:101216040 363.229