Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02180 ATGCACGCCAAATCCATTCTCTTCTTCATTTTCTTCATCCTCCTCCTTTTCTCGTTTTCTATCTTCCTCGGCACCATTGATCCCAGATCATACTTCTTCCCCTCGTTCCAATTACCTTCCGTTTGTGCTCCACCTGACCCTCCTCTCAGAGTTTTTATGTACGATCTCCCCCCTCGGTTCAACGTTGCAATGCTTAACCGCAGAACCCCCTTCCAGAATCCAGTCACGGTCTCCACCTGGCCGCCTTGGCCCAAATATTCCGGCCTCAAGAAGCAGCACAGCGTGGAGTACTGGATGATGGGCTCGCTTTTGTTCCCTGCCGATGAGAGTGGTGCTGGGAGGGAGGCTGTAAGAGTTTTGGATCCCGAAATGGCCGATGTTTTTTTCGTCCCCTTCTTCTCTTCCTTGAGTTTCAATACGCACGGTCATAATATGACTGATCCAGATACTGAGATTGATCACCAATTGCAGATTGATTTACTGAAAATCTTGCAAGAGTCTAAGTTTTGGCAGAGGTCTGGAGGAAGGGACCATGTTATTCCTTTGACCCACCCAAATGCTTTTAGGTTTCTTCGACAACATGTCAATGCCTCGATTCTAATTGTTGTAGATTTCGGTCGATATCCAAAAACCATGTCCAATCTTGAAAAGGATGTAGTCTCTCCATATGTACATGTAGTGAATTCTTTTGTTGACGATGACCCACAAGACCCATATGAGTCTCGCACAACACTTTTATTCTTTCAGGGGAGGACATTCAGGAAAGATGAGGGCATTATCCGTGTTAAACTAGCAAAAATTTTAGCTGGGTATGACGATGTTCATTATGAACGGAGTGCTGCATCAACAGAAAGCATTGAAGCGTCTTCTCGAGGGATGCGTTCGTCAAAGTTCTGTCTGCATCCAGCTGGAGACACTCCATCGTCATGTCGCCTGTTTGATGCCATAGTGAGTCACTGTGTTCCTGTCATTGTGAGTGATCGAATTGAGCTGCCATACGAGTCTGAGATAGACTATGCTGAGTTCTCATTGTTTTTCTCCTTCGATGAGGCATTGGAACCTGGGTACATGGTTGATAAACTAAGGCAATTTCCAAAGGAGAGGTGGATCCAAATGTGGGGAAGGCTTAAAAACATCTCTCATCATTTTGAATTCCAGTATCCCCCGAGAAAGGAAGATGCAGTGAACATGTTGTGGAGACAGGTGAAGCAGAAGCTTCATAAGGTTAAACTTGGTTTGCATAGAAGAGATCGGCTGAAAATTCCGGACTGGTGGCAAAGAAGGAAATGA 1290 45.35 MHAKSILFFIFFILLLFSFSIFLGTIDPRSYFFPSFQLPSVCAPPDPPLRVFMYDLPPRFNVAMLNRRTPFQNPVTVSTWPPWPKYSGLKKQHSVEYWMMGSLLFPADESGAGREAVRVLDPEMADVFFVPFFSSLSFNTHGHNMTDPDTEIDHQLQIDLLKILQESKFWQRSGGRDHVIPLTHPNAFRFLRQHVNASILIVVDFGRYPKTMSNLEKDVVSPYVHVVNSFVDDDPQDPYESRTTLLFFQGRTFRKDEGIIRVKLAKILAGYDDVHYERSAASTESIEASSRGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPYESEIDYAEFSLFFSFDEALEPGYMVDKLRQFPKERWIQMWGRLKNISHHFEFQYPPRKEDAVNMLWRQVKQKLHKVKLGLHRRDRLKIPDWWQRRK 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57789746 57791735 - Bda004522.1 Bda01g02180 2180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02180 429 PANTHER EXOSTOSIN FAMILY PROTEIN-RELATED 23 411 - -
Bda01g02180 429 Pfam Exostosin family 47 360 IPR040911 -
Bda01g02180 429 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 23 411 IPR004263 GO:0006486|GO:0016757
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02180 Bda11g00397 CCT
Bda01g02180 Bda11g00397 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02180 Bda-Chr1:57789746 Bda11g01702 Bda-Chr11:51257232 1.33E-102 dispersed
Bda01g02180 Bda-Chr1:57789746 Bda02g00497 Bda-Chr2:45886597 5.22E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02180 - K23200 jre:108982516 672.159