Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00014 ATGGCGGACCAATATGTCTTCGATGCCCACGCCGCTTCCCACTTGCACAACCACCTCAGACTCACCTTCGCTTCCGGCAAGACCAAGACTTATCAATGGAGAATATCGCAGTTGAAATCTCTCCTCAAACTTTGCGACGACCGCGAGCAGGATATCGCCGATGCTCTTCGCTCCGACCTTTCCAAGCCCGATGTCGAATCTCTCGTTTATGAGGTAGCTATGCTGAAGAATTCATGTAGAAATGCGCTGGCCCAACTCAAGCACTGGGTCATACCTGAAAAGGCTAAAACATCAATTACCACATTTCCTTCTTCAGCTGAAATTGTATCAGAACCTCTGGGTGTTGTGCTAATTATATCAGCCTGGAATTATCCTTTCTTGTTGTCACTTGATCCATTAATTGGAGCTATTGCTGCGGGTAATGCTGTGGTTTTGAAGCCATCAGAAATCTCTCCTGCAACGTCATCTTTACTTGCAAAACTATTAGGTGAATATCTGGATAACTCTTCTATAAAGGTCGTGGAAGGAGCTGTTTCTGAAACTTCAGCTTTGTTGGAACAGAAGTGGGACAAAATATGCTATACAGGCAACGGTAGAGTGGGACGCATCATAATGACTGCTGCTGCGAAGCATCTTACACCAGTACTTTTGGAGCTGGGAGGAAAATCGCCTGTTGTTGTCGATTCAGGCATTAGTTTAAAGGTGGCAACTAGACGAATAATTGCTGGTAAGTGGGGATGTAATAATGGACAAGCATGTATCTCTCCAGACTACATCATAACTACAAAAGATTTTGCTCCTAAGTTGATAGAATCTCTAAAGCAAGAATTAGAAAAGTTCTACGGGAAGAATCCGTTGGAATCAAAGGAATTATCCCGGATTGTAAACATCAATCACTTTACTCGCTTATCAAAGATCATGGATGAAGAGAATGTTTCAGACAAGATTATCTTTGGAGGTGAAAGAGACAAATCCAACTTAAGGATTGCTCCTACCATCTTGCTGGACGTCCCTCGAGACTCTTTGATCATGACTGAGGAAATTTTTGGTCCGTTGCTTCCCATTCTTACGGTTGACAAAGTGGAAGACAGTTTGGATATAATAAACTCTGGTCCAAAGCCACTTGCGGCGTACATATTCACAAACAACAAGAAGCTCAAGGAGCAATTCGTGTCATCTGTCTCGGCGGGGGGTTTGGTTATCAACGACACAACTATACATCTTGCAGTTCACAGCCTACCATTTGGAGGAGTGGGAGATAGTGGAATAGGTGCATACCATGGGAAATTTTCTTTCGATGCTTTTAGCCATAAGAAAGCAGTCATCTATCGAGGATTCGCAGGTGATGCTTCAATGAGGTACCCGCCATTCACTTCTGGAAAGTTGAGAATTCTCAAGGCTCTTGTTGGTGGTAGTTTATGGGGCGTTATCCGTGCTCTTTTCGGGTGGTCTTGA 1455 43.78 MADQYVFDAHAASHLHNHLRLTFASGKTKTYQWRISQLKSLLKLCDDREQDIADALRSDLSKPDVESLVYEVAMLKNSCRNALAQLKHWVIPEKAKTSITTFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPLIGAIAAGNAVVLKPSEISPATSSLLAKLLGEYLDNSSIKVVEGAVSETSALLEQKWDKICYTGNGRVGRIIMTAAAKHLTPVLLELGGKSPVVVDSGISLKVATRRIIAGKWGCNNGQACISPDYIITTKDFAPKLIESLKQELEKFYGKNPLESKELSRIVNINHFTRLSKIMDEENVSDKIIFGGERDKSNLRIAPTILLDVPRDSLIMTEEIFGPLLPILTVDKVEDSLDIINSGPKPLAAYIFTNNKKLKEQFVSSVSAGGLVINDTTIHLAVHSLPFGGVGDSGIGAYHGKFSFDAFSHKKAVIYRGFAGDASMRYPPFTSGKLRILKALVGGSLWGVIRALFGWS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 343996 347725 + Bda015947.1 Bda03g00014 3273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00014 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Bda03g00014 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 439 IPR016162 GO:0016491
Bda03g00014 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
Bda03g00014 484 PIRSF ALDH 2 478 IPR012394 GO:0006081
Bda03g00014 484 PANTHER ALDEHYDE DEHYDROGENASE 4 484 IPR012394 GO:0006081
Bda03g00014 484 Pfam Aldehyde dehydrogenase family 29 441 IPR015590 GO:0016491
Bda03g00014 484 PANTHER ALDEHYDE DEHYDROGENASE 4 484 - -
Bda03g00014 484 SUPERFAMILY ALDH-like 18 446 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00014 Bda-Chr3:343996 Bda11g01389 Bda-Chr11:17414737 0 dispersed
Bda03g00014 Bda-Chr3:343996 Bda06g00234 Bda-Chr6:4124204 3.60E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00014 K00128 - twl:120017045 784.637