Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00063 ATGGGGACAGGAGAAGATGGTACACCATCTAAAAATTCAAAACCAGTATCTTCGTCTCAGGAAATACCAACAACTCCATATCCTGATTGGTCAAGCTCGATACAGGCTTATTATGGTGCTGGTGCTACACCACCTCCATTTTTTGCATCGACTGTAGCTTCTCCAACTCCTCACCCCTATTTGTGGGGAAGTCAGCATCCTTTGATTCCACCATATGGGACTCCAGTACCGTATACGGCAATTTATCCTCCCGGGGGGATTTATGCTCATCCTAGTATGGCAATGACTCCTGGCACAGTTCATACAAATACAGAGCTGGAAGGGAAGTCTCCAGAGGTAAAAGACAGGGCTTTGGCAAAGAAAGCGATAGGAAATGCGGGCTCATCTGGTGGCAAAGCAGGGGAGGGTGGCAAGGTGGCCTCAGGTTCAGGAAACGATGGTGCTTCTCAAAGTGCGGATAGTGGCTCGGAGGGTTCGTCTGACGGTAGTGATGAGAATCCTAATCAACAGGAATTTACGGGAAATAAAAAGGGTAGCTTTGACCAGATGCTTGCTGATGGTATTGTTTTTTCTGTGATGGTGGAATGTATCTATTTCTTCCGATTATCTTCTTTATTTACTGTGTTGTTTTCAGGAGCAAATGCACAAAGTAGCGGAAAACCTGCTACTAATCTAAATATTGGAATGGATTTATGGAATACTTCTTCTGGCTCTGCGAAAGCCAGATCAAATCCATCTGCTACTTCATCTGCTATCATTCCTGCAACGATGATTGGCCGTGAAGGCGTAATGCCAGACCAATGGATTCAAGATGAACGGGAACTAAAACGACAGAAGAGGAAGCAGTCGAATAGGGAGTCAGCCCGGAGGTCAAGATTGCGTAAGCAGGCGGAGTGTGAAGAGCTACAAGCAAGAGTGCAGACTTTGAGCAACGAGAATCGGACTCTCCGGGACGAACTGCAGAGGATTTCTGAAGAATGCGAGAAGCTCACATCGGAAAACAGTAACATGAAGGAAGAACTAACCCGGTTGTGCGGACCGGAGGCGTTGGCTAACATGGAACAAGAGGGAGGTGAAGGGGGATAG 1086 46.87 MGTGEDGTPSKNSKPVSSSQEIPTTPYPDWSSSIQAYYGAGATPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYTAIYPPGGIYAHPSMAMTPGTVHTNTELEGKSPEVKDRALAKKAIGNAGSSGGKAGEGGKVASGSGNDGASQSADSGSEGSSDGSDENPNQQEFTGNKKGSFDQMLADGIVFSVMVECIYFFRLSSLFTVLFSGANAQSSGKPATNLNIGMDLWNTSSGSAKARSNPSATSSAIIPATMIGREGVMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLSNENRTLRDELQRISEECEKLTSENSNMKEELTRLCGPEALANMEQEGGEGG 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1031813 1034645 - Bda018758.1 Bda04g00063 5085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00063 361 CDD bZIP_plant_GBF1 277 327 IPR045314 GO:0003700|GO:0006355
Bda04g00063 361 MobiDBLite consensus disorder prediction 123 178 - -
Bda04g00063 361 Pfam bZIP transcription factor 272 334 IPR004827 GO:0003700|GO:0006355
Bda04g00063 361 PANTHER G-BOX-BINDING FACTOR 1 1 356 - -
Bda04g00063 361 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Bda04g00063 361 MobiDBLite consensus disorder prediction 1 28 - -
Bda04g00063 361 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 279 294 IPR004827 GO:0003700|GO:0006355
Bda04g00063 361 MobiDBLite consensus disorder prediction 274 295 - -
Bda04g00063 361 Gene3D - 275 329 - -
Bda04g00063 361 PRINTS cAMP response element binding (CREB) protein signature 309 326 - -
Bda04g00063 361 PRINTS cAMP response element binding (CREB) protein signature 224 239 - -
Bda04g00063 361 PRINTS cAMP response element binding (CREB) protein signature 289 309 - -
Bda04g00063 361 PRINTS cAMP response element binding (CREB) protein signature 271 287 - -
Bda04g00063 361 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 274 337 IPR004827 GO:0003700|GO:0006355
Bda04g00063 361 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 356 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bda04g00063 361 SUPERFAMILY Leucine zipper domain 275 331 IPR046347 GO:0003700|GO:0006355
Bda04g00063 361 MobiDBLite consensus disorder prediction 143 177 - -
Bda04g00063 361 SMART brlzneu 272 336 IPR004827 GO:0003700|GO:0006355
Bda04g00063 361 Coils Coil 285 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00063 Bda10g00121 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00063 Bda-Chr4:1031813 Bda07g00057 Bda-Chr7:849594 6.51E-62 dispersed
Bda10g00121 Bda-Chr10:3166845 Bda04g00063 Bda-Chr4:1031813 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15780 PF07777 MFMR 3.60E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00063 K09060 - csv:101217128 456.832