Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g00586 ATGGGTCGACTCGAGTCTGCGTTGAATAATCCGACCTCATCGATGAAGGCGAAAGAGATCCGGAAGTATCTCCATGGGAAAAAACTCATTCTTGGTGTTGATGATATGGACATATTCAAAGGTATTGGCTTGAAGTTATTAGCTTTCGAGCAACTCTTCTATCGGAATCCGGATTTGCGAAACAAAATCGTGCTCGTGCAGATCGTCAATCCTGCACGAAGCACTGGAAAAGACGTTGAAGAAGCTGAAAAGGAGACTTACTCGATAACTGAGAGGATCAACATGGCTTTTGGCTCCCCTGGCTATTTACCGGTCATCTTAATCGATCGTCCTATTCCCTTCCAAGAAAAGACGACATATTATGCCCTGGCAGAGTGTTGTATCGTGAATGCCGTAAGGGACGGTATGAACTTGATTCCGTACGAATATATTGTTTGCAGACAAGGAACACCGAAAATGGACAAAGCATTAGACATCGATTCGAATTTGCCTCGGACGAGTACACTTGTCGTGTCGGAGTTCATTGGTTGCTCGCCATCTTTGAGTGGAGCCATCAGAGTGAACCCTTGGGATGTCGATGCAGTTGCTGATGCTCTAAATATGGCCATCTCCATGCCTAATTTGGAGAAGCAGTTGAGACATGAAAAGCATTACCGTTATGTTAGCTCTCACGATGTCGCTTTTTGGGCTCGGAGTTTTATGCAAGATTTGGAGCGAGCTTGCAAAGATCATTACAGCAAACGTTGTTGGGGAATCGGGTTCGGTTTGGGTTTCAGAATATTGTCCCTTTCTCCGAGTTTTAGGAAGCTTTCTATCGACCATATTGTCTCTGCTTATAAGCGGACTAGTAGGAGAGTGATGTTTTTGGATTACGACGGGACCGTAGTTCCTCAATCGTCGATCGAGAAAAGTCCATCTCCGGAAGTCATTTCCGTGCTGAATAATCTATGTGCAGACCCAAAAAACACAGTGTTTATCGTAAGTGGGAGGGAGAAAAGCTCTCTCGATTCATGGTTTGTTTCGTGCGAGAATCTCGGTATAGCAGCGGAACATGGATTCTTCTTAAGGTGGAGTAAGAAGTCGAGATGGGAAGTCTGTGCTGGAACAGCTGATTTTGCTTGGAAAAGGATTGCCGAACCGGTGATGAAATTATACACCGAGGCAACAGACGGGTCGTATATCGAGACCAAGGAAAGTGCATTGGTCTGGCACCATCGAGATGCCGACCCTGATTTCGGGTCGTGCCAAGCAATGGAGCTCTTGGACCATCTTGAAAATGTGCTTGCAAATGAGCCCGTCGTCGTGAAGAGAGGCCAGCATATCGTCGAAGTAAAGCCACAGGGAGTGACGAAAGGATTTGTCGCGGAGAAAGTACTGTCTGGAATGATTGGCAAGGAGAACCCTCCCGATTTCGTGATGTGTATTGGCGACGATAGATCAGATGAAGACATGTTCGAGAGCATATTAAGCACTTCCTACAATTCTGCACCCGAGATCTTTGCATGCACTGTCGGCCAGAAACCGAGCAAGGCCAAATACTATCTCGACGATACTTTGGATGTGGTGAAACTGCTTCAGGGTCTCTCCATCGCATCCAATCGGAAGTTGAGGTGGAGCTCGGAAGCTCAAGTTGTCTTCACCAATGCCGTTTGA 1653 46.46 MGRLESALNNPTSSMKAKEIRKYLHGKKLILGVDDMDIFKGIGLKLLAFEQLFYRNPDLRNKIVLVQIVNPARSTGKDVEEAEKETYSITERINMAFGSPGYLPVILIDRPIPFQEKTTYYALAECCIVNAVRDGMNLIPYEYIVCRQGTPKMDKALDIDSNLPRTSTLVVSEFIGCSPSLSGAIRVNPWDVDAVADALNMAISMPNLEKQLRHEKHYRYVSSHDVAFWARSFMQDLERACKDHYSKRCWGIGFGLGFRILSLSPSFRKLSIDHIVSAYKRTSRRVMFLDYDGTVVPQSSIEKSPSPEVISVLNNLCADPKNTVFIVSGREKSSLDSWFVSCENLGIAAEHGFFLRWSKKSRWEVCAGTADFAWKRIAEPVMKLYTEATDGSYIETKESALVWHHRDADPDFGSCQAMELLDHLENVLANEPVVVKRGQHIVEVKPQGVTKGFVAEKVLSGMIGKENPPDFVMCIGDDRSDEDMFESILSTSYNSAPEIFACTVGQKPSKAKYYLDDTLDVVKLLQGLSIASNRKLRWSSEAQVVFTNAV 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8106162 8107978 - Bda023850.1 Bda06g00586 8168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g00586 550 Pfam Trehalose-phosphatase 288 517 IPR003337 GO:0003824|GO:0005992
Bda06g00586 550 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 287 486 IPR006379 -
Bda06g00586 550 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 242 - -
Bda06g00586 550 Gene3D - 284 409 IPR023214 -
Bda06g00586 550 Gene3D - 412 542 IPR023214 -
Bda06g00586 550 SUPERFAMILY HAD-like 285 527 IPR036412 -
Bda06g00586 550 TIGRFAM T6PP: trehalose-phosphatase 284 527 IPR003337 GO:0003824|GO:0005992
Bda06g00586 550 Gene3D Glycogen Phosphorylase B; 2 222 - -
Bda06g00586 550 CDD HAD_TPP 286 523 - -
Bda06g00586 550 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 540 - -
Bda06g00586 550 Pfam Glycosyltransferase family 20 2 238 IPR001830 GO:0003824|GO:0005992
Bda06g00586 550 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 540 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00586 Bda-Chr6:8106162 Bda11g00014 Bda-Chr11:210111 0 dispersed
Bda06g00586 Bda-Chr6:8106162 Bda07g01593 Bda-Chr7:29562641 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g00586 K16055 - tcc:18603871 884.789