Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00496 AATCTTTTTTCTGCAATGGAGTTTAGATTTGGGTCTGAGGAAAAACCAGAAACGTCATGTTCTTCGTCGGCCGAGAGCAGTACTTCCCGTCTGGAGGGTCTGTCGGATGAAGAGGTTATACTGGCTTCTAACAGGCCGAAGAAACCAGCCGGTAGGAGGGTTTTTCGGGAAACGAGGCACCCGGTTTTTAGAGGGGTCCGCCGGAGGAACAACGGTAAATGGGTCTGCGAGCTGCGCGAGCCGAAAACGAAAGCGAGGATTTGGCTCGGGACTTACCCGAAGGCAGAGATGGCGGCGAGAGCGCACGACGTCGCCGCCCTAGCTCTGCGGGGAAAGGAGGCTTGCCTGAATTTCGCCGACTCTAAGTGGCGATTGCCAAAGCCATTACAGTCGAACGACGTGGGTGATATTAAGATTGCTGCTGCTCTCGCAGCCCGGAGTTTCGAGGTGGACGGAGGATGTGGCGGAGGTGAAGCGACGAAGGAGAAAATGGATGACGAAGAGCTAGAAGTTGATACACCACTGTTGATCGCTAGAATAGCTGAAACTCCTCTTCTCTCTCCGAGACCGTTCTGTGCAGGGCATGTGAATTACGTCAGCTGGGATGACACTGAGAGTAGTGCTGACATGTCGTTATGGAATTTTTGCATTTAA 654 52.75 NLFSAMEFRFGSEEKPETSCSSSAESSTSRLEGLSDEEVILASNRPKKPAGRRVFRETRHPVFRGVRRRNNGKWVCELREPKTKARIWLGTYPKAEMAARAHDVAALALRGKEACLNFADSKWRLPKPLQSNDVGDIKIAAALAARSFEVDGGCGGGEATKEKMDDEELEVDTPLLIARIAETPLLSPRPFCAGHVNYVSWDDTESSADMSLWNFCI 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6224391 6225044 + Bda025602.1 Bda07g00496 9386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00496 217 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
Bda07g00496 217 SUPERFAMILY DNA-binding domain 62 121 IPR016177 GO:0003677
Bda07g00496 217 MobiDBLite consensus disorder prediction 1 32 - -
Bda07g00496 217 MobiDBLite consensus disorder prediction 15 30 - -
Bda07g00496 217 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
Bda07g00496 217 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F 165 217 - -
Bda07g00496 217 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F 11 150 - -
Bda07g00496 217 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
Bda07g00496 217 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Bda07g00496 217 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Bda07g00496 217 CDD AP2 63 121 IPR001471 GO:0003700|GO:0006355
Bda07g00496 217 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 165 217 IPR045277 GO:0003700
Bda07g00496 217 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 150 IPR045277 GO:0003700
Bda07g00496 217 Gene3D AP2/ERF domain 62 120 IPR036955 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00496 Bda08g00533 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00496 Bda-Chr7:6224391 Bda15g00742 Bda-Chr15:10900169 1.86E-57 dispersed
Bda07g00496 Bda-Chr7:6224391 Bda08g00533 Bda-Chr8:5329583 3.54E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16107 PF00847 AP2 8.80E-14 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00496 - - bhj:120092445 209.149