Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01454 ATGGGGGGCGACGAGGAGAAGCCGATGGAGCAGAGCTTGTTGCCCGAACAGGAGGAAAAGCAAAGAGCCGACTCCATTTTAACATGGGTTTCTTTCTTTCAAGAGGTGAAAACGTTGGGGGGTATTGCAGCTCCCATGATTGTTGTGATTCTCTCTCAGTACTTGTTGCAGGTTATTTCTCTCATGATGGTGGGTCATCTTGGTGAGCTTGCGCTCTCTAGCACTGCCATAGCCATTTCTCTGTCTGGAGTTTCTGGGTTTAGTCTTCTGTTAGGCATGGCCAGTGCCCTTGAAACTCTTTGTGGACAAGCTTATGGAGCCAAGCAATATCAAAAACTTGGAACTCAGACCTATACTGCTATATTTTCTCTCATTTTAGTCTGTCTCCCTATATCTTTAATATGGATTTACATTGGGAAGATATTGATATTTCTTGGTCAAGATCCTCTTATTTCTCAAGAAGCCGGCAAGTTCATCGTTTGGCTTCTTCCCGCACTCTTCGCTTATGGGTGTCTTCAACCACTTGTGAGATATTTCCAGACACAGAGTTTGATCATTCCCATGCTTATAAGCTCGTGCATCGTCCTTTGTTTCCATATACCTCTCTCTTATGCGTTAGTGTTTAAGTCTGGACTTAATAATATCGGAGGAGCATTAGCAATCAGTATTTCAAATTGGTTGAATGTAATTTTGCTTGCACTCTACATGAAATTCTCTCCTTCCTGTGCAAAAACTCGTGGAGAAATTTCGATGGAGCTTTTCTATGGACTTCGAGAGTTCTTTCTCTTTGCAATACCGTCGGCAGTAATGATTTGCCTTGAATGGTGGTCATTTGAGCTGCTAATCTTACTATCTGGGCTTCTACCAAATCCAGAGCTTGAAACTTCAGTTCTATCAGTATGTCTCTCGACTATCTCAACACTCTATGCCATACCATATGGACTTGGTGCTGCTGGAAGTACTCGAGTTTCAAATGAGCTTGGGGCCGGGAACCCACAAGCTGCTCGAATAGCTACCTTTGCCGTGTTGTTTCTTGCAGTGGCAGAAACTAGTATAGTAAGCTCAGCACTCTTCGTAAGTCGGCGTGTTTTTGGCTACGTTTTCAGCAACGAGAAGGAAGTTGTGGATTATGTCACCACCATGGCTCCTCTTGTCTGTCTCTCTGTTATAATGGACAGCATACAAGGAGTTCTTTCAGGAATTGCTAGAGGATGTGGGTGGCAACACATAGGAGCTTATGTAAATCTTGGCGCGTTCTATCTTTGTGGAATTCCAGCTGCGGCATTTCTCGGTTTCTGGGTAAAGCTAAAAGGAAGAGGGCTATGGATAGGAATACAAATGGGGGCTTTTGTTCAGACCCTTCTGCTTTCCTTAGTTACGAGCCGTATTAAATGGGAAAAAGAGGCAAAGAAAGCAAGGGAGAGGATATTTCAGGGAATGTAG 1443 43.8 MGGDEEKPMEQSLLPEQEEKQRADSILTWVSFFQEVKTLGGIAAPMIVVILSQYLLQVISLMMVGHLGELALSSTAIAISLSGVSGFSLLLGMASALETLCGQAYGAKQYQKLGTQTYTAIFSLILVCLPISLIWIYIGKILIFLGQDPLISQEAGKFIVWLLPALFAYGCLQPLVRYFQTQSLIIPMLISSCIVLCFHIPLSYALVFKSGLNNIGGALAISISNWLNVILLALYMKFSPSCAKTRGEISMELFYGLREFFLFAIPSAVMICLEWWSFELLILLSGLLPNPELETSVLSVCLSTISTLYAIPYGLGAAGSTRVSNELGAGNPQAARIATFAVLFLAVAETSIVSSALFVSRRVFGYVFSNEKEVVDYVTTMAPLVCLSVIMDSIQGVLSGIARGCGWQHIGAYVNLGAFYLCGIPAAAFLGFWVKLKGRGLWIGIQMGAFVQTLLLSLVTSRIKWEKEAKKARERIFQGM 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27018607 27022204 - Bda028282.1 Bda07g01454 10344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01454 480 Pfam MatE 266 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bda07g01454 480 Pfam MatE 45 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bda07g01454 480 CDD MATE_eukaryotic 35 471 IPR045069 GO:0042910|GO:1990961
Bda07g01454 480 PANTHER PROTEIN DETOXIFICATION 31 472 - -
Bda07g01454 480 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 472 - -
Bda07g01454 480 TIGRFAM matE: MATE efflux family protein 45 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g01454 Bda11g00126 CCT
Bda07g01454 Bda11g00126 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00350 Bda-Chr3:2948684 Bda07g01454 Bda-Chr7:27018607 1.34E-149 dispersed
Bda07g01454 Bda-Chr7:27018607 Bda15g00832 Bda-Chr15:12658977 4.50E-151 dispersed
Bda07g01454 Bda-Chr7:27018607 Bda14g01477 Bda-Chr14:21882601 2.59E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01454 K03327 - mnt:21412002 725.702