Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g00383 ATGCTGGTGTTTTGCATATGTGGGATCATAGCAAGCACGGCGCTGGGTAAAGGAGAAGACCATCTTTTAGAATATGCTGTCACGGCTGGTTTGACTGTAGTCGTTGTGATTTTCTCAATCGGACCAATCTCCGGCGCTCATATTAACCCTGCTGTGACTCTGGCCTTCGCCATTTTTGGTTATTTTCCGTGGTCTAAGGTTTCGCCATACATTATAGCTCAAACATTGGGATCAGTACTGGGAACGTACATTGGAAGCTGTGTTTATGGAGTAAAATCTGAACTTTTTAGGACAAGATCAGTTCATAACTCCATTTCTGCTTTCTGGGTAGAGCTCATTGCGACTTTTGTAATCCTCTTTCTCATCACTTCTTTGAATCATGAAGCACGAATTGTTGGCCACGTATCTGGTTTTGTTATCGGAATATCCATTGGGCTCGGCGTGTTAATCACAGGGCCAGTTTCAGGAGGATCAATGAACCCAGCAAGATCTTTAGGACCTGCAATTCTTTCATGGAGTTTTAGAGACATATGGGTTTACATTACTGCTCCTTTTCTTGGAGCGTTTCTTGGCTGTCTCTTGTCTCGTTATCTTCGTCTTCGCCCCCATCTGAACACCTCTCTCATCGGTTCGTTGGTCTTAAATGGCAGCTGA 654 44.19 MLVFCICGIIASTALGKGEDHLLEYAVTAGLTVVVVIFSIGPISGAHINPAVTLAFAIFGYFPWSKVSPYIIAQTLGSVLGTYIGSCVYGVKSELFRTRSVHNSISAFWVELIATFVILFLITSLNHEARIVGHVSGFVIGISIGLGVLITGPVSGGSMNPARSLGPAILSWSFRDIWVYITAPFLGAFLGCLLSRYLRLRPHLNTSLIGSLVLNGS 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3967019 3967962 - Bda024826.1 Bda08g00383 11239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g00383 217 PANTHER AQUAPORIN NIP7-1-RELATED 1 203 - -
Bda08g00383 217 PRINTS Major intrinsic protein family signature 66 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda08g00383 217 PRINTS Major intrinsic protein family signature 110 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda08g00383 217 PRINTS Major intrinsic protein family signature 141 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda08g00383 217 PRINTS Major intrinsic protein family signature 178 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda08g00383 217 PRINTS Major intrinsic protein family signature 29 53 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda08g00383 217 ProSitePatterns MIP family signature. 47 55 IPR022357 -
Bda08g00383 217 Gene3D Glycerol uptake facilitator protein. 1 205 IPR023271 -
Bda08g00383 217 PANTHER AQUAPORIN NIP2-1 1 203 IPR034294 -
Bda08g00383 217 Pfam Major intrinsic protein 20 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda08g00383 217 SUPERFAMILY Aquaporin-like 1 200 IPR023271 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00383 Bda09g00618 CCT
Bda07g00175 Bda08g00383 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00383 Bda-Chr8:3967019 Bda09g00618 Bda-Chr9:8973448 1.57E-43 dispersed
Bda08g00383 Bda-Chr8:3967019 Bda08g00385 Bda-Chr8:4013790 4.86E-150 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g00383 K09874 - zju:107423284 271.937