Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda08g01280 ATGCCGAACGGAGAAGACGGAACCCTAGAAGCTTTGAAATGCGCTGCTTGCGAATGCCACAGAAATTTCCACCGAAAAGAAGTAGACGGCGAGCGCCAATTGATGAGTCCAAGCTCGAGAAGAACCATAGTCCTCAATCACCTCCAGCTTCCGCCGCCATTGCCGTCGCCCCACCACCATAAATTCTCAATAGGAGGCCTGAATTTCCACTCAAGCCCTACCGCTCCTATCGTCGCGCCTATGAACGTCGCTTTCGGCGCAAACGAGTCATCAAGCGAAGATCTTAACGTGTTTCAGTCCAACGCAGATGCAACTACATACCCGCCATTTTCTCTCTCGAAGAAAAGGTTCAGAACGAAGTTCACTCAAGAACAGAAGAACAAAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGCAAAAGCAAGACGAACAAGAAGTAGACAAGTTTTGCGCTGAAGTTGGAGTAAAGAGACAAGTTCTAAAGGTATGGATGCACAACAACAAGACGAGCACCATTAAAAAGCAAAACGAGAATCATGATCAAATCTTGGACATAACCGGAGCAGATGATGAAATGATTGACTCGGAAAAGCTAGAATAG 606 46.7 MPNGEDGTLEALKCAACECHRNFHRKEVDGERQLMSPSSRRTIVLNHLQLPPPLPSPHHHKFSIGGLNFHSSPTAPIVAPMNVAFGANESSSEDLNVFQSNADATTYPPFSLSKKRFRTKFTQEQKNKMLEFAEKVGWRMQKQDEQEVDKFCAEVGVKRQVLKVWMHNNKTSTIKKQNENHDQILDITGADDEMIDSEKLE 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 52070127 52070732 - Bda030299.1 Bda08g01280 12136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda08g01280 201 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 1 175 - -
Bda08g01280 201 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 1 27 IPR006456 -
Bda08g01280 201 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 175 - -
Bda08g01280 201 SUPERFAMILY Homeodomain-like 107 172 IPR009057 -
Bda08g01280 201 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 114 170 IPR006455 -
Bda08g01280 201 Pfam ZF-HD protein dimerisation region 1 28 IPR006456 -
Bda08g01280 201 Gene3D - 100 175 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01497 Bda08g01280 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01280 Bda-Chr8:52070127 Bda11g01865 Bda-Chr11:53736302 2.02E-52 dispersed
Bda01g01497 Bda-Chr1:50842309 Bda08g01280 Bda-Chr8:52070127 4.05E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16328 PF04770 ZF-HD_dimer 2.90E-12 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda08g01280 - - csv:101216040 283.878