Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda09g00618 ATGCCGGAATCTGAGGGTGGTGGTACGCCGACAGCGTCGGCGCCGGCGACTCCGATATCCCCGGGAGGTCCGCTGTTCCCGTCGTTCCGAGTGGATTCGATGTCGTATGATCGGAAGCCAATGCCGGGGTGCAAGTGCTTCCCTGTTAACGCTCCCACGTGGGGACAGCCTCACACGTGCTTCACCGACTTCCCTGCGCCTGACGTCTCTCTCACTAGAAAGATAGGTGCTGAGTTTGTGGGGACCTTCATCCTCATATTCGGAGCGACAGCTGCGCCTATCGTCAACCAAAAGTACAATGGCGCTGAGACTCTGATCGGCAATGCAGCCAGCGCTGGGCTGGCGGTGATGATAGTGATCCTCTCCACCGGCCACATCTCCGGTGCCCACCTCAACCCGGCTCTCACCATCGCCTTTGCCGCTCTGCGCCACTTCCCTTGGGTGCAAGTTCCGGCTTACATTGCCGCCCAGGTTTCAGCCTCCATTTGTGCTTCCTTCGCGCTTAAAGGTGTCTTCCATCCGTATATGTCCGGCGGAGTCACTACTCCGTCCGTGAGCACCGGCCAGGCATTTGCTATCGAACTCATCATCACTTTCAATCTCTTGTTTGTTGTTACTGCTGTGGCTACTGACACTCGAGCTGTGGGAGAGTTGGCAGGCATTGCAGTCGGCGCTACTGTTATGCTCAATATTCTAGTGGCCGGGCCGGCAACTGGGGGTTCGATGAATCCGGTGCGGACACTGGGGCCGGCAATTGCAGCCGGAAACTATCGAGATTTGTGGGTGTACCTGGTGGCACCGACCATCGGGGCACTGGCTGGGGCTGGAATCTACACTCTGGTAAAGCTCAAGGACGACGGGACTGAGCCTCCTCGCCCTAGGAGCTTCCGCCGCTAG 897 58.42 MPESEGGGTPTASAPATPISPGGPLFPSFRVDSMSYDRKPMPGCKCFPVNAPTWGQPHTCFTDFPAPDVSLTRKIGAEFVGTFILIFGATAAPIVNQKYNGAETLIGNAASAGLAVMIVILSTGHISGAHLNPALTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPYMSGGVTTPSVSTGQAFAIELIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPATGGSMNPVRTLGPAIAAGNYRDLWVYLVAPTIGALAGAGIYTLVKLKDDGTEPPRPRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8973448 8976653 - Bda031243.1 Bda09g00618 12868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda09g00618 298 MobiDBLite consensus disorder prediction 1 24 - -
Bda09g00618 298 SUPERFAMILY Aquaporin-like 70 285 IPR023271 -
Bda09g00618 298 CDD MIP 73 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00618 298 ProSitePatterns MIP family signature. 130 138 IPR022357 -
Bda09g00618 298 Gene3D Glycerol uptake facilitator protein. 65 290 IPR023271 -
Bda09g00618 298 PANTHER AQUAPORIN NIP2-1 10 292 IPR034294 -
Bda09g00618 298 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 10 292 - -
Bda09g00618 298 PRINTS Major intrinsic protein family signature 112 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00618 298 PRINTS Major intrinsic protein family signature 193 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00618 298 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00618 298 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00618 298 PRINTS Major intrinsic protein family signature 261 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00618 298 PRINTS Major intrinsic protein family signature 149 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda09g00618 298 Pfam Major intrinsic protein 69 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00383 Bda09g00618 CCT
Bda07g00175 Bda09g00618 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00383 Bda-Chr8:3967019 Bda09g00618 Bda-Chr9:8973448 1.57E-43 dispersed
Bda08g00385 Bda-Chr8:4013790 Bda09g00618 Bda-Chr9:8973448 4.26E-43 dispersed
Bda09g00618 Bda-Chr9:8973448 Bda12g00572 Bda-Chr12:11762990 1.47E-116 dispersed
Bda07g00175 Bda-Chr7:2155047 Bda09g00618 Bda-Chr9:8973448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda09g00618 K09874 - csv:101212651 503.442