Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00126 ATGGCGTTTGTGCATTGCTCTTCCTCTCGCTTTTTGGTCTTCTTCTTTCTTTCGCTTCTGAAACTGGGTTGCCGAGTTGTGTCGGAGCCGACTCAGGACAGACAAGCTCTTCTTAGTTTCCTCTCGAGAATTCCTCATGCTAATCGAGTTCGATGGAATTCCTCGGATTCAGCCTGTAATTGGATCGGAGTGGAATGCGATCCGAATAAGTCATTTGTTTACTCTCTCCGGCTGCCTGGAGTTGGCCTTGTAGGACCCATTCCGGAGAATTCGATTGGCTCGTTGAGTCAGCTTCGAGTTCTGAGTCTCCATTCGAATCGTCTCTCCGGCCAGATTCCTTCTGATTTATCCAATTTGACTTTTCTCAGGAATCTGTACCTACAGAATAATGAACTTTCCGGCGAGTTTCCAACGAGTTTGGTTTCTTTGACTCGTCTGGTTCGACTGGATTTGTCTTCAAACAACTTTTCCGGCTCCATTCCGTCGTCTGTAAACAATCTAACTCGTCTGACCGGACTTTTTCTCCAAAACAATGCCTTCTCCGGTGACTTGTCCGGTGTCGGAGCCGGTAACCTAAACAGCTTCAATGTATCTAATAACCAACTAAACGGCTCAATTCCTGAGAGTTTGAAGAAATTTCCGGCTTCCTCCTTCGCTGGTAACTTAGGTCTCTGTGGCGGACCTCTATCTTCCTGCAACCCATCCGAATCTCCAGTCGAGAAAAAATTGAAAAGGCTCTCGACGGCAGCCATTATCGGAATAGTAATTGCTTGCGCTTTTGTCTTATTTCTCCTCCTCCTTTGCCTCTTCCTCTGCCTACGCAAGCGCAGCCGACCGCAGCAGGCAAAGTCGCCAAAAGCAGCGGTTCCAACCCGCGCCATTGCAGCGGAGGCCGGAACTTCGTCATCCAAGGACGATGTCACCGGAGGATCGATCGACGCAGAGAGAAATAAGCTGGTTTTCTTCGACGGCGGAATTTACAGCTTCGATTTGGAGGACCTGTTGAGAGCTTCTGCAGAAGTTTTGGGGAAAGGAAGCGTCGGAACTTCGTACAAAGCAGTGTTGGAAGAAGGAACTACTGTAGTTGTGAAGAGATTGAAGGATGTGGTAGTGACCAAAAAGGAATTTGAATCAACAATGGAGGTCGTGGGGAAGATGTATCACGAAAATGTAGTTTCTCTCAGAGCTTTTTACTATTCCAAGGATGAGAAATTGCTTGTTTCTGATTTCATGGCTTCCGGCAGCTTATCTGCCTCACTTCACGGCAGCAGAGGGTCAGGCCGTACGCCACTGGACTGGTCTACCCGGTTGAAAATTGCCCTCAGCGCCGCCAGGGGCCTGTCCTACCTCCACCTTTCTGGCAAACTAGTTCATGGCAACCTAAAAGCCTCCAACGTTCTTCTACGACCAGACTACGAGGCTTCACTTTCGGATTTCGGACTCAACCCCCTTTTCGGCACCTCCACCCCACCCAACCGCGTAGCCGGGTACCGCTCGCCGGAAGTTGTTGAAACCAGAAAAGTAACGTTCAAGGCAGACGTGTACAGCTTCGGAGTACTCTTATTAGAACTACTCACCGGAAAGGCGCCTAACCAAGCGTCGTTAGGCGAAGAAGGGATCGATCTCCCGCGATGGGTTCAGTCGGTGGTCCGGGAGGAATGGACGGCGGAGGTTTTTGATGTGGAGCTGATGAGGTATCATAATATAGAAGAAGAGATGGTTCAGCTGTTGCAGATTGCCATGACGTGTGTGGCAATTGTTCCGGATCAGAGGCCGGAGATCGGGGAGGTGGTCCGTCTGATCGAGGAGATTCGGAGGAGTGAGGCTGATGATGGGTTACGGCAGTCTTCTGATGATCCATCGAAAGGATCGGACGGTCAGAGTTGGACTCCGGAATTGAGAAGCTCACCTAGAGGTGTCACACCGTAG 1929 50.03 MAFVHCSSSRFLVFFFLSLLKLGCRVVSEPTQDRQALLSFLSRIPHANRVRWNSSDSACNWIGVECDPNKSFVYSLRLPGVGLVGPIPENSIGSLSQLRVLSLHSNRLSGQIPSDLSNLTFLRNLYLQNNELSGEFPTSLVSLTRLVRLDLSSNNFSGSIPSSVNNLTRLTGLFLQNNAFSGDLSGVGAGNLNSFNVSNNQLNGSIPESLKKFPASSFAGNLGLCGGPLSSCNPSESPVEKKLKRLSTAAIIGIVIACAFVLFLLLLCLFLCLRKRSRPQQAKSPKAAVPTRAIAAEAGTSSSKDDVTGGSIDAERNKLVFFDGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFESTMEVVGKMYHENVVSLRAFYYSKDEKLLVSDFMASGSLSASLHGSRGSGRTPLDWSTRLKIALSAARGLSYLHLSGKLVHGNLKASNVLLRPDYEASLSDFGLNPLFGTSTPPNRVAGYRSPEVVETRKVTFKADVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMTCVAIVPDQRPEIGEVVRLIEEIRRSEADDGLRQSSDDPSKGSDGQSWTPELRSSPRGVTP 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1705789 1708236 - Bda004838.1 Bda11g00126 15234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00126 642 ProSiteProfiles Protein kinase domain profile. 336 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00126 642 PANTHER OS05G0480400 PROTEIN 15 622 - -
Bda11g00126 642 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Bda11g00126 642 PANTHER OS05G0588300 PROTEIN 15 622 - -
Bda11g00126 642 SUPERFAMILY Protein kinase-like (PK-like) 340 601 IPR011009 -
Bda11g00126 642 Gene3D Ribonuclease Inhibitor 189 236 IPR032675 -
Bda11g00126 642 MobiDBLite consensus disorder prediction 608 642 - -
Bda11g00126 642 Gene3D Transferase(Phosphotransferase) domain 1 411 624 - -
Bda11g00126 642 SUPERFAMILY L domain-like 33 247 - -
Bda11g00126 642 MobiDBLite consensus disorder prediction 619 642 - -
Bda11g00126 642 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Bda11g00126 642 CDD STKc_IRAK 342 604 - -
Bda11g00126 642 Pfam Protein kinase domain 339 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00126 642 Gene3D Phosphorylase Kinase; domain 1 306 410 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g01454 Bda11g00126 CCT
Bda07g01454 Bda11g00126 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01192 Bda-Chr5:59960829 Bda11g00126 Bda-Chr11:1705789 1.53E-155 dispersed
Bda09g00021 Bda-Chr9:334378 Bda11g00126 Bda-Chr11:1705789 0 dispersed
Bda11g00126 Bda-Chr11:1705789 Bda14g01104 Bda-Chr14:9917092 0 dispersed
Bda11g00126 Bda-Chr11:1705789 Bda01g00068 Bda-Chr1:11807725 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69884 PF00069 Pkinase 1.10E-34 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00126 - - cpap:110818580 916.376