Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01188 ATGTATAGGACTGTAGCTACGGCGGCAGCTTCGACCACAACCGCGACGGTGACCAAAGGAGGATCACCGTCGGATAATGTGGATTATGTGGTTACTTTGGATCAAGTTCCGTGGTGGAGCGATGCAGAATGTAGATCTTCATTGGAATTTGAAGGTGAAGATCCTTCTTTCTCTAATTCATACTTCCCCGATCCTCTGACCTCATTGTCTGGGCCGGAGAGCGGTATAAATGGAATGCTTTCGAGGTTTCCCGTCGATCAAGAAATTAATTCCAAGATATATATTTGGAGAGGGAATCCGTGGAATCTTGAGGTAGATGCCGTTGTCAATTCTACGAATGAGAGTTTGGATGAAGCCCACAGCAGCACAGGGTTGCACTCTGCAGCTGGATCTGGTCTTGCCGAAGAATGTGCCTCACTGGGCGGTTGTCGCACTGGGATGGCAAAAGTAACTAACGCATATGACCTTCCAGCTAGGAAGGTCATACATACTGTCGGCCCAAAGTATGCAGTAAAGTACCATACTGCAGCTGAAAATGCTTTAAGTCATTGCTATCGATCTTGTCTCGAACTTCTCATTGAAAATGGCCTTCAAAGCATTGCTATGGGCTGTATATACACTGAGAATAAAAACTATCCTCGTGAACCTGCTGCACATGTGGCTATAAGGACGGTACGGAGGTTTCTCGAGAAGCAAAAAGATAAAATTAAAGCAGTTGTATTTTGTACTGCCTCATCATCAGACACAGAGATATATAAAAGGCTGCTTCCGCTTTACTTTCCACGTGATAAACATGAAGAGGAAGTTGCCTCATCAAAACTTCCTGCAGATGTAGGAGATGAGAATGGCGAGACTGTTATAGATGAACGGAAGATCAGGATAAAGCCTTTGCCAAAGAAAAATATTCCAAAACCTCCTCCCCCACCTCTAGACGATCCTCCTGTTAGTAATGTTGGCTTGGCACGTAGGAGTTCGTCGTATTTGGATTCATATTTGGATCCTGCTTTTATGTCCTTAATTAAAGACCCAGATCAGAGACGGAGAGAGCAATGGGAAAAAACTGCCCAGGCGCAGAGTGGATGGAATTGTGCGAAAATGCTCGGATTGGGCGACCTTGGGGGGCCTCCACTATCTGCCGCTGAAGAATACTCACTTCATTCAAGATTTCTTGCCAAAGCAAATTCTCTTAATTTGTCTGAAATCGCAGAAATGAAAATAATTTATCGTGGTGGAGTTGATAGCGAAGGCCGTCCTGTGATGGTTGTTGTGGGAGCCCATTTTTTGTTGCGATGTCTCGATCTAGAGCGATTTGTTCTTTATGTGATAAAGGATTTTTTCCCTTCATTTCAGGAATTTGAGCCGTTGATACAGAAGCCTTATACGATTGTCTACTTCCATTCAGCAGCATCTTTGCAGCCTTATTCACCTTTTTCTGAAAAAAAAAAATCCAGTCGACCCGACTTGGGATGGATGAGAAGACTACAGCAAATACTCGGTCGGAAACACCAGCGGAACCTTCATGCAATATATGTTCTTCATCCTTCGTTTGGACTAAGGGCTACAATTTTGGCTATGCAACTGTTTGTAGACAATGCGGTATGGAACAAAGTGGTTTATGCTGATAAACTTCTGCAGTTGTTTAAATACGTTCCCCGCGAGCAGTTGACGATTCCCGATTTTGTCTTCCAGCATGATTTGGAAGTGAACGGAGGGAAGAGCGTTATGGTCGATCCTCGAACAAAGTATGTGTACCATCGACCTTAA 1764 44.1 MYRTVATAAASTTTATVTKGGSPSDNVDYVVTLDQVPWWSDAECRSSLEFEGEDPSFSNSYFPDPLTSLSGPESGINGMLSRFPVDQEINSKIYIWRGNPWNLEVDAVVNSTNESLDEAHSSTGLHSAAGSGLAEECASLGGCRTGMAKVTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTENKNYPREPAAHVAIRTVRRFLEKQKDKIKAVVFCTASSSDTEIYKRLLPLYFPRDKHEEEVASSKLPADVGDENGETVIDERKIRIKPLPKKNIPKPPPPPLDDPPVSNVGLARRSSSYLDSYLDPAFMSLIKDPDQRRREQWEKTAQAQSGWNCAKMLGLGDLGGPPLSAAEEYSLHSRFLAKANSLNLSEIAEMKIIYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVIKDFFPSFQEFEPLIQKPYTIVYFHSAASLQPYSPFSEKKKSSRPDLGWMRRLQQILGRKHQRNLHAIYVLHPSFGLRATILAMQLFVDNAVWNKVVYADKLLQLFKYVPREQLTIPDFVFQHDLEVNGGKSVMVDPRTKYVYHRP 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12237670 12245319 + Bda007687.1 Bda11g01188 16296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01188 587 Pfam Divergent CRAL/TRIO domain 416 565 IPR001251 -
Bda11g01188 587 CDD Macro_GDAP2-like 91 259 IPR035793 -
Bda11g01188 587 MobiDBLite consensus disorder prediction 299 314 - -
Bda11g01188 587 SUPERFAMILY CRAL/TRIO domain 398 555 IPR036865 -
Bda11g01188 587 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 397 561 IPR001251 -
Bda11g01188 587 SMART YBR022w_8 92 221 IPR002589 -
Bda11g01188 587 MobiDBLite consensus disorder prediction 269 318 - -
Bda11g01188 587 CDD SEC14 404 558 IPR001251 -
Bda11g01188 587 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 11 567 - -
Bda11g01188 587 ProSiteProfiles Macro domain profile. 80 260 IPR002589 -
Bda11g01188 587 SMART sec14_4 397 564 IPR001251 -
Bda11g01188 587 Gene3D - 399 568 IPR036865 -
Bda11g01188 587 Gene3D Leucine Aminopeptidase, subunit E, domain 1 22 265 IPR043472 -
Bda11g01188 587 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 11 567 - -
Bda11g01188 587 SUPERFAMILY Macro domain-like 83 289 IPR043472 -
Bda11g01188 587 Pfam Macro domain 109 221 IPR002589 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02135 Bda11g01188 CCT
Bda01g02135 Bda11g01188 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01027 Bda-Chr5:58730387 Bda11g01188 Bda-Chr11:12237670 1.23E-09 dispersed
Bda14g00207 Bda-Chr14:1431542 Bda11g01188 Bda-Chr11:12237670 1.46E-20 transposed
Bda01g02135 Bda-Chr1:57327029 Bda11g01188 Bda-Chr11:12237670 0 wgd
Bda11g01188 Bda-Chr11:12237670 Bda11g01314 Bda-Chr11:14204465 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01188 K24997 - mnt:21400244 956.051