Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01257 GCTGAGTTTCTTCTGGAAGATGGCTACACCGTGACGACAGTGATCGACGGCCATAAAATCGGCGTAAATCCATACGCTGTTCTTCCTCGAGCAGGATCTCCTGATCTTATCGTGCTCGATTCCTCAAATAGTATCTTCTACACCTTATCGCTCCCGTTGTCTACTGAAAACCCGATTAAAAGGTTGTCTGGAAATGGTAGCGGCTATTCGGATGGAAATCTGGATTCCGCCCTCTTTAGAAACCCTCGGAGCTTTGCGATGGACACAAAGGGAAATATTTACGTCGCGGACAAGAAAAACCATGTGATTCGTAAAATCGGCGACAAAGGTTCAATTTGTCCAGGTGTATCCACAATTGCGGGAGGTTATTCGCAGAGCTTGAAGCCAGTTGGGCATGAAGATGGACCGGCTCAAAATGCAACCTTTTCCACTGATTTCAACATCGCCTTTGTTGCAGAGGAGTGTGCTCTACTGGTATCAGATCATGGCAATCAGTTGATCCGACAAATTAATCTCAAACCCGACGATTGCACCACAAAACCACCCCCTGGAGTTGGAGGAGCTTCCATTGTGATTTGGGCAATTGAACTTGGATTTTCTTGCCTGATTGGTATAGTTTTGGGGATAGTGATTCGACCTTATATTTTTCGCAGTGAAGGTTTGAGCGGCAGCCATTGCATGCAGACATGGAAGCTCTCCCGAACCCATCTGGGGAGTCAAGATTGGATTCACTTCTCCGGCATCAGAAGCGCAACTGCTAGCTCCTTAGTACTTGGTTCATTGAAGAGACTCCTCTGGTTGAGCCTCTCTCATCTTTCACTTCTATTTAGGATGGTAAGTGCAGAGCCTCAGGCTGTTCCAAGCAAGTCTGTTTCCTTGCTTGAGGACGATTCATTCATCACTGGGGAGATAATGAAGTCAAAGCCGGATTTTTATGCTGATCAGTTGAAGGATCTGATAGATTTTGGTGGAAATGTGGAGTCATCTTCAAATTCAGGTAATGAAGAAGATGATATTGTTGGAACTACTTCTTGTCTGGAGAGTATGATTGAAGCTAACATCATGAATTTCACCAAGAGGGTCGGAGAGTCGGTTCCATTAGAGACATCTTTGGGTTTGGTTAGGAGGAAATGA 1134 45.33 AEFLLEDGYTVTTVIDGHKIGVNPYAVLPRAGSPDLIVLDSSNSIFYTLSLPLSTENPIKRLSGNGSGYSDGNLDSALFRNPRSFAMDTKGNIYVADKKNHVIRKIGDKGSICPGVSTIAGGYSQSLKPVGHEDGPAQNATFSTDFNIAFVAEECALLVSDHGNQLIRQINLKPDDCTTKPPPGVGGASIVIWAIELGFSCLIGIVLGIVIRPYIFRSEGLSGSHCMQTWKLSRTHLGSQDWIHFSGIRSATASSLVLGSLKRLLWLSLSHLSLLFRMVSAEPQAVPSKSVSLLEDDSFITGEIMKSKPDFYADQLKDLIDFGGNVESSSNSGNEEDDIVGTTSCLESMIEANIMNFTKRVGESVPLETSLGLVRRK 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13193050 13194481 + Bda007772.1 Bda11g01257 16365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01257 377 SUPERFAMILY NHL repeat 7 173 - -
Bda11g01257 377 Gene3D - 8 171 IPR011042 -
Bda11g01257 377 PANTHER - 2 363 - -
Bda11g01257 377 PANTHER NHL DOMAIN-CONTAINING PROTEIN 2 363 - -
Bda11g01257 377 Pfam NHL repeat 79 104 IPR001258 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02227 Bda11g01257 CCT
Bda01g02227 Bda11g01257 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00485 Bda-Chr4:53306668 Bda11g01257 Bda-Chr11:13193050 2.57E-85 dispersed
Bda04g00486 Bda-Chr4:53372685 Bda11g01257 Bda-Chr11:13193050 8.76E-29 dispersed
Bda11g01257 Bda-Chr11:13193050 Bda14g01150 Bda-Chr14:10680784 1.21E-36 dispersed
Bda01g02227 Bda-Chr1:58091049 Bda11g01257 Bda-Chr11:13193050 1.72E-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01257 - - pvy:116121337 317.39