Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00400 GCTGTTATCGTTGCAGAAATGGCTTCAGATCCTCAAGTTTATACTTTTGGTGAAGTGGCCAAGCATAATCATAAGAAGGATTGCTGGCTTATCATCTCTGGAAAGGTGTATGATGTGACCCCGTTTCTCGACGAACATCCAGGAGGTGATGAAGTCTTGGTTTTAGCCGCAGAGAAAGATGCGACGGATGATTTCGAAGATGTTGGGCACAGCGATTCGGCTCGAGAGATGATGGAGAAATACTACGTGGGGGAGTTGGACGAGTCTAGTCTTCCGAAGAAACCGAATTTCATCCCGCCTTCGACTGCTCAAGCAGCTCAAACCGTCCACCCATCTTCTGGAGCTTTCCGGGTGAGAATGTTTCAAATTCTGACCTTCATTGTGGTGTTGGGACTGGCTTTCGCTCTGCAATATTTTGGCAAGAAAGAATGA 432 46.99 AVIVAEMASDPQVYTFGEVAKHNHKKDCWLIISGKVYDVTPFLDEHPGGDEVLVLAAEKDATDDFEDVGHSDSAREMMEKYYVGELDESSLPKKPNFIPPSTAQAAQTVHPSSGAFRVRMFQILTFIVVLGLAFALQYFGKKE 143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4962212 4963506 + Bda001301.1 Bda13g00400 18531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00400 143 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 11 87 IPR001199 -
Bda13g00400 143 PANTHER - 7 141 - -
Bda13g00400 143 Pfam Cytochrome b5-like Heme/Steroid binding domain 18 86 IPR001199 -
Bda13g00400 143 PANTHER CYTOCHROME B5 7 141 - -
Bda13g00400 143 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 42 49 IPR018506 GO:0020037
Bda13g00400 143 Gene3D - 5 92 IPR036400 -
Bda13g00400 143 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 9 100 IPR036400 -
Bda13g00400 143 PRINTS Cytochrome B5 signature 46 60 IPR001199 -
Bda13g00400 143 PRINTS Cytochrome B5 signature 61 68 IPR001199 -
Bda13g00400 143 PRINTS Cytochrome B5 signature 74 86 IPR001199 -
Bda13g00400 143 PRINTS Cytochrome B5 signature 36 46 IPR001199 -
Bda13g00400 143 SMART Cyt_b5_2 14 87 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00353 Bda-Chr11:3925250 Bda13g00400 Bda-Chr13:4962212 1.29E-50 dispersed
Bda13g00400 Bda-Chr13:4962212 Bda13g00491 Bda-Chr13:5773805 3.09E-51 dispersed
Bda13g00400 Bda-Chr13:4962212 Bda08g00091 Bda-Chr8:825471 9.57E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00400 K23490 - zju:107423685 192.971