Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g00653 | ATGGAAAATTTGTTGGCACTAACTACCCTGCGATTGCAGACCAATCAGCTGTCTGGTACACTTGATGTTTTGCAAAATCTGCCACTCAAAGATTTGAATATAGAGAACAATCTTTTTTCTGGCCCCATACCTGTGACGCTACTGAACATCCCAAGTTTCAGAAATGATGGAAATCCATTCAATTCTTCTGTTTCTCCAGTACCTCCTCCTTCACCCCCATCGAAACAATCACCAGTGCCTTTCTTTTCTGGAGAACCATCTTCAGAAGAATCACCAGAAAAGCCAGCTGACGGACCATCGTTGCCAAATGAATCAAAATCTGGAACTTTTTTAACTACCAAAAAGGTCGTTTGGCTATCAATTGCTGGGGTTTTGTCGTTTATAATTTTTGCATTAGTGCTTGTGCTATTCATGCCAAGGTGTATCAGAGGAAGTAGAGAGGTTGGCAGAAATTTTAAGCGGCATCAAATTGGTGCATACAAAGGTGACAAAGAGAGCCCCAAGAATGATATGCCCTCTACCCAACCAATCAATAAAATCCAGAGAGTTCCAAAAGATGCTGTTGGGAAGCCAAAGGAAGGTTATCAATCAGAGACTCAGAGAATAGGAGTGATACCAGAACGGAAGACGCCAAAGCAGGATGAGCATGAGATGGATATTAGTGCTCTGGATGACTATTTTATTCCTCCCCCTCCCCCATCATGTCCAGTAAAGGTCATTAAGGAGCCCTTTATTCAAACTGAAGTGACTCCAATGAAGCCTTCGCCCACAAAATTAAACACCCCCACTTTCGCAAAGTCTTTCACTATTGCATTCCTTCAGCAATGTACAAACAGTTTCTCTCAAGAAAATCTAATAGGAGGAGGAATGCTGGGGAACGTTTATAGGGCAATGGTACCTAATGGAAAGCTGCTTGCTGTGAAGAAACTAGATAAGAGGAGTTGTAGTCAACAAAAGGATGATGACTTTCTTGAAATGGTGAATAATATCGATCTGATACGCCATCATAATATTGTGGAGCTCAGGGGTTACTGTGCAGAACATGATCAAAGACTGCTTATCTATGAGTACTGTAATAATGGTACCCTGCAAGATGCATTGCACTACGACAATGAAACTAAAAAAAATCTTTCTTGGAACATCCGCATACAGATGGCTCTTGGAGCTGCTAGAGCCTTGGAGTATCTGCACGAGGTCTGTCAGCCTCCGGTTATGCATAGAAATTTTAAGTCTGTCAATATTCTCCTCGATCATGACTATGCCGTCCGTGTCTCTGATTGTGGTTTATCTCCACTTATATCATCAGGCTCTGTCAGTCAGTTGTCTGGCCATCTGCAATCTGTGTATGGATGGGGAGCTCCAGAATATGAGTTGGGAACTTACACTTTGAAGAGCGACGTTTACAGCTTTGGCGTGGTAATGTTGGAACTTTTGACAGGCCGGATGTCGTATGACAGAACGAGGATCCGAGGAGAACAATTTCTGGTTAGATGGGCGATTCCGCAGCTTCATGACATCAATGCATTGTCAAGAATGGTCGACCCTTCTCTCGGTCTTCATTACCCACCGAAATCCTTATCACACTTCGCGGACATCATATCTCGTTGCGTTCAGTCTGAGCCAGAATTCAGGCCAGCAATGTCTGAAGTCGTACAGGATCTGGTAGACATGATAAGAAGAGAGCCTCATGGGAGTGGATTGGCCGAACACTGA | 1713 | 43.43 | MENLLALTTLRLQTNQLSGTLDVLQNLPLKDLNIENNLFSGPIPVTLLNIPSFRNDGNPFNSSVSPVPPPSPPSKQSPVPFFSGEPSSEESPEKPADGPSLPNESKSGTFLTTKKVVWLSIAGVLSFIIFALVLVLFMPRCIRGSREVGRNFKRHQIGAYKGDKESPKNDMPSTQPINKIQRVPKDAVGKPKEGYQSETQRIGVIPERKTPKQDEHEMDISALDDYFIPPPPPSCPVKVIKEPFIQTEVTPMKPSPTKLNTPTFAKSFTIAFLQQCTNSFSQENLIGGGMLGNVYRAMVPNGKLLAVKKLDKRSCSQQKDDDFLEMVNNIDLIRHHNIVELRGYCAEHDQRLLIYEYCNNGTLQDALHYDNETKKNLSWNIRIQMALGAARALEYLHEVCQPPVMHRNFKSVNILLDHDYAVRVSDCGLSPLISSGSVSQLSGHLQSVYGWGAPEYELGTYTLKSDVYSFGVVMLELLTGRMSYDRTRIRGEQFLVRWAIPQLHDINALSRMVDPSLGLHYPPKSLSHFADIISRCVQSEPEFRPAMSEVVQDLVDMIRREPHGSGLAEH | 570 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 7491609 | 7494691 | - | Bda001575.1 | Bda13g00653 | 18784 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g00653 | 570 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED | 1 | 565 | - | - | |
Bda13g00653 | 570 | MobiDBLite | consensus disorder prediction | 63 | 79 | - | - | |
Bda13g00653 | 570 | Gene3D | Transferase(Phosphotransferase) domain 1 | 358 | 562 | - | - | |
Bda13g00653 | 570 | MobiDBLite | consensus disorder prediction | 59 | 106 | - | - | |
Bda13g00653 | 570 | SUPERFAMILY | Protein kinase-like (PK-like) | 254 | 554 | IPR011009 | - | |
Bda13g00653 | 570 | Gene3D | Phosphorylase Kinase; domain 1 | 246 | 357 | - | - | |
Bda13g00653 | 570 | ProSiteProfiles | Protein kinase domain profile. | 280 | 570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda13g00653 | 570 | MobiDBLite | consensus disorder prediction | 159 | 200 | - | - | |
Bda13g00653 | 570 | PANTHER | OS01G0253100 PROTEIN | 1 | 565 | IPR045271 | GO:0004714|GO:0006468 | |
Bda13g00653 | 570 | Pfam | Protein tyrosine and serine/threonine kinase | 283 | 554 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00925 | Bda-Chr2:49467885 | Bda13g00653 | Bda-Chr13:7491609 | 6.03E-126 | dispersed | |
Bda03g01600 | Bda-Chr3:55312020 | Bda13g00653 | Bda-Chr13:7491609 | 2.50E-82 | dispersed | |
Bda07g01009 | Bda-Chr7:11865319 | Bda13g00653 | Bda-Chr13:7491609 | 1.15E-170 | dispersed | |
Bda13g00653 | Bda-Chr13:7491609 | Bda01g00267 | Bda-Chr1:27218381 | 1.45E-72 | dispersed | |
Bda13g00653 | Bda-Chr13:7491609 | Bda06g00321 | Bda-Chr6:5260118 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
70007 | PF07714 | PK_Tyr_Ser-Thr | 2.00E-43 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g00653 | - | - | zju:107416767 | 725.317 |