Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00653 ATGGAAAATTTGTTGGCACTAACTACCCTGCGATTGCAGACCAATCAGCTGTCTGGTACACTTGATGTTTTGCAAAATCTGCCACTCAAAGATTTGAATATAGAGAACAATCTTTTTTCTGGCCCCATACCTGTGACGCTACTGAACATCCCAAGTTTCAGAAATGATGGAAATCCATTCAATTCTTCTGTTTCTCCAGTACCTCCTCCTTCACCCCCATCGAAACAATCACCAGTGCCTTTCTTTTCTGGAGAACCATCTTCAGAAGAATCACCAGAAAAGCCAGCTGACGGACCATCGTTGCCAAATGAATCAAAATCTGGAACTTTTTTAACTACCAAAAAGGTCGTTTGGCTATCAATTGCTGGGGTTTTGTCGTTTATAATTTTTGCATTAGTGCTTGTGCTATTCATGCCAAGGTGTATCAGAGGAAGTAGAGAGGTTGGCAGAAATTTTAAGCGGCATCAAATTGGTGCATACAAAGGTGACAAAGAGAGCCCCAAGAATGATATGCCCTCTACCCAACCAATCAATAAAATCCAGAGAGTTCCAAAAGATGCTGTTGGGAAGCCAAAGGAAGGTTATCAATCAGAGACTCAGAGAATAGGAGTGATACCAGAACGGAAGACGCCAAAGCAGGATGAGCATGAGATGGATATTAGTGCTCTGGATGACTATTTTATTCCTCCCCCTCCCCCATCATGTCCAGTAAAGGTCATTAAGGAGCCCTTTATTCAAACTGAAGTGACTCCAATGAAGCCTTCGCCCACAAAATTAAACACCCCCACTTTCGCAAAGTCTTTCACTATTGCATTCCTTCAGCAATGTACAAACAGTTTCTCTCAAGAAAATCTAATAGGAGGAGGAATGCTGGGGAACGTTTATAGGGCAATGGTACCTAATGGAAAGCTGCTTGCTGTGAAGAAACTAGATAAGAGGAGTTGTAGTCAACAAAAGGATGATGACTTTCTTGAAATGGTGAATAATATCGATCTGATACGCCATCATAATATTGTGGAGCTCAGGGGTTACTGTGCAGAACATGATCAAAGACTGCTTATCTATGAGTACTGTAATAATGGTACCCTGCAAGATGCATTGCACTACGACAATGAAACTAAAAAAAATCTTTCTTGGAACATCCGCATACAGATGGCTCTTGGAGCTGCTAGAGCCTTGGAGTATCTGCACGAGGTCTGTCAGCCTCCGGTTATGCATAGAAATTTTAAGTCTGTCAATATTCTCCTCGATCATGACTATGCCGTCCGTGTCTCTGATTGTGGTTTATCTCCACTTATATCATCAGGCTCTGTCAGTCAGTTGTCTGGCCATCTGCAATCTGTGTATGGATGGGGAGCTCCAGAATATGAGTTGGGAACTTACACTTTGAAGAGCGACGTTTACAGCTTTGGCGTGGTAATGTTGGAACTTTTGACAGGCCGGATGTCGTATGACAGAACGAGGATCCGAGGAGAACAATTTCTGGTTAGATGGGCGATTCCGCAGCTTCATGACATCAATGCATTGTCAAGAATGGTCGACCCTTCTCTCGGTCTTCATTACCCACCGAAATCCTTATCACACTTCGCGGACATCATATCTCGTTGCGTTCAGTCTGAGCCAGAATTCAGGCCAGCAATGTCTGAAGTCGTACAGGATCTGGTAGACATGATAAGAAGAGAGCCTCATGGGAGTGGATTGGCCGAACACTGA 1713 43.43 MENLLALTTLRLQTNQLSGTLDVLQNLPLKDLNIENNLFSGPIPVTLLNIPSFRNDGNPFNSSVSPVPPPSPPSKQSPVPFFSGEPSSEESPEKPADGPSLPNESKSGTFLTTKKVVWLSIAGVLSFIIFALVLVLFMPRCIRGSREVGRNFKRHQIGAYKGDKESPKNDMPSTQPINKIQRVPKDAVGKPKEGYQSETQRIGVIPERKTPKQDEHEMDISALDDYFIPPPPPSCPVKVIKEPFIQTEVTPMKPSPTKLNTPTFAKSFTIAFLQQCTNSFSQENLIGGGMLGNVYRAMVPNGKLLAVKKLDKRSCSQQKDDDFLEMVNNIDLIRHHNIVELRGYCAEHDQRLLIYEYCNNGTLQDALHYDNETKKNLSWNIRIQMALGAARALEYLHEVCQPPVMHRNFKSVNILLDHDYAVRVSDCGLSPLISSGSVSQLSGHLQSVYGWGAPEYELGTYTLKSDVYSFGVVMLELLTGRMSYDRTRIRGEQFLVRWAIPQLHDINALSRMVDPSLGLHYPPKSLSHFADIISRCVQSEPEFRPAMSEVVQDLVDMIRREPHGSGLAEH 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7491609 7494691 - Bda001575.1 Bda13g00653 18784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00653 570 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 1 565 - -
Bda13g00653 570 MobiDBLite consensus disorder prediction 63 79 - -
Bda13g00653 570 Gene3D Transferase(Phosphotransferase) domain 1 358 562 - -
Bda13g00653 570 MobiDBLite consensus disorder prediction 59 106 - -
Bda13g00653 570 SUPERFAMILY Protein kinase-like (PK-like) 254 554 IPR011009 -
Bda13g00653 570 Gene3D Phosphorylase Kinase; domain 1 246 357 - -
Bda13g00653 570 ProSiteProfiles Protein kinase domain profile. 280 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00653 570 MobiDBLite consensus disorder prediction 159 200 - -
Bda13g00653 570 PANTHER OS01G0253100 PROTEIN 1 565 IPR045271 GO:0004714|GO:0006468
Bda13g00653 570 Pfam Protein tyrosine and serine/threonine kinase 283 554 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00925 Bda-Chr2:49467885 Bda13g00653 Bda-Chr13:7491609 6.03E-126 dispersed
Bda03g01600 Bda-Chr3:55312020 Bda13g00653 Bda-Chr13:7491609 2.50E-82 dispersed
Bda07g01009 Bda-Chr7:11865319 Bda13g00653 Bda-Chr13:7491609 1.15E-170 dispersed
Bda13g00653 Bda-Chr13:7491609 Bda01g00267 Bda-Chr1:27218381 1.45E-72 dispersed
Bda13g00653 Bda-Chr13:7491609 Bda06g00321 Bda-Chr6:5260118 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70007 PF07714 PK_Tyr_Ser-Thr 2.00E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00653 - - zju:107416767 725.317