Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00491 ATGTTCCACCCTAAGAAGCCATCAACTATGAATTCTCATGATCAAAGATCTTCCATGTGTGTCCAAGGCGACTCGGGACTAGTCCTCACCACCGACCCGAAGCCCCGCCTCCGGTGGACCGTCGAGCTCCATGCTCGCTTTGTCGATGCAGTCACCCAGCTTGGAGGCCCTGATAAAGCAACCCCAAAAACGATCATGAGGGTTATGGGAGTGAAGGGTCTTACTCTTTACCACCTCAAAAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAGCCTCATAAAGAATTCGCCGATCACTCGATGAAGCATGCTTCTTCGTTCGAACTTCAACGAAACGTAGCATCTTCATCTAATGTTATTGGCCGCAATAAGAACGATAACTCGCACATGGTGGATGCAATTAAGATGCAGATGGAGGTGCAGAGAAGACTGCATGAACAACTAGAGGTGCAAAGACACCTTCAACTGAGAATCGAAGCACAAGGGAAGTACATGCAAAATATACTAGAAAAGGCTTGTCAAACTCTTGTCGGCGAGAATATGGGCTGTGGAGGATCGTCCTTTAAGACAATGGTTCCATGTTTTCAAGACCTGAACATTTGTGGAGGAGACCAGCTTGATCTGGAGCAAAATATAGATAATTTTCTTCCGGTCAATGACGATATTTGTCTCGAAAAGAAGGCAGGAAGCTCGTATAGCAATGGTGGAAAGAGCCCTCTTCTTTGGTCAGATGATCTTCAACTTCACATGTTGGGGCCGACGACAACTTCTTCCGGTGGTTTTAAAGGAGAAAGAGTCGTCGATCTAGACTCCATTTCTGATATCTATGACACAAAGCCATAG 843 46.14 MFHPKKPSTMNSHDQRSSMCVQGDSGLVLTTDPKPRLRWTVELHARFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFADHSMKHASSFELQRNVASSSNVIGRNKNDNSHMVDAIKMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQNILEKACQTLVGENMGCGGSSFKTMVPCFQDLNICGGDQLDLEQNIDNFLPVNDDICLEKKAGSSYSNGGKSPLLWSDDLQLHMLGPTTTSSGGFKGERVVDLDSISDIYDTKP 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3575195 3576558 - Bda027237.1 Bda14g00491 20542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00491 280 Gene3D - 33 91 - -
Bda14g00491 280 Pfam Myb-like DNA-binding domain 37 85 IPR001005 -
Bda14g00491 280 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Bda14g00491 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 1 251 - -
Bda14g00491 280 Pfam MYB-CC type transfactor, LHEQLE motif 130 175 IPR025756 -
Bda14g00491 280 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 34 89 IPR006447 GO:0003677
Bda14g00491 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 91 IPR017930 -
Bda14g00491 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 251 IPR044848 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00227 Bda-Chr6:3844334 Bda14g00491 Bda-Chr14:3575195 1.50E-09 dispersed
Bda06g00233 Bda-Chr6:4119095 Bda14g00491 Bda-Chr14:3575195 2.12E-65 dispersed
Bda13g00487 Bda-Chr13:5755722 Bda14g00491 Bda-Chr14:3575195 1.62E-68 dispersed
Bda14g00491 Bda-Chr14:3575195 Bda11g00350 Bda-Chr11:3890043 7.00E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17026 PF00249 Myb_DNA-binding 6.70E-06 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00491 - - vri:117908572 399.823