Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00661 ATGCTATTTGGAGTTTCAGGAGGAAGTTCTCCTTTCTTATATATGCTTCCCTCAGCTCTTTACAGACCTAAAATGGCCGCTTTTGGCCTTTTCTCTGCCTGTCCTTGCAGCTCATTGCGTGGACCGTATCGGCCTAGACGTTCTGTTTCTTGCTGTGTTGGGCCTTCTTCTGTTACTGGAACTCATGTTTCAAAAGTACCAGTTAAAAGATCAAGAAGATTGGAAGGAGCTGGAAAAAGCATGGAGGATTCAGTTCAACGAAAAATGGAACAGTTTTATGAAGGCTCAGATGGCCCTCCACTCCGTGTCTTACCAATTGGTGGACTGGGAGAAATCGGAATGAATTGCATGCTTGTTGGAAACTATGATCGCTATATTATGATTGATGCCGGTGTTATGTTTCCAGATCATGATGAGCTCGGAGTCCAAAAAATTATACCCGATACGACGTTTATCAAAAGATGGAGCCATAAAATTGAAGCAGTGATCATTACACATGGCCATGAAGATCACATCGGTGCGTTGCCTTGGGTTATTCCAGCTTTGGATTCCCATACACCAATATTTGCATCATCCTTCACAATGGAGCTTATAAGGAAGCGTTTGAAGGAACATGGGCTCTTTGTATCTTCTAGGCTTAAGGTATTTACTACAAAAAGAAAATTCCAGGCTGGGCCATTTGAAATAGAGCCAATCAGGGTAACCCATTCCATTCCTGATTGTTGTGGACTAGTTCTTCGCTGTTCTGATGGTACAATTCTTCATACTGGGGATTGGAAGATTGATGAATCTCCATTGGATGGTAAAATATTTGATCGAGAAGCTCTAGAAAAACTCTCGAAAGAAGGAGTAACGCTGATGATGAGTGACTCAACAAATGTTCTCTCTCCGGGAAGAACGATGAGTGAATCTACTGTGGCTGATGCACTGAAGAGGCATATTTCAGCTGCCAAAGGAAGGGTTATCACCACTCAATTTGCATCAAACATTCACCGTCTTGGAAGTGTGAAAGCCGCTGCTGATATAACTGGTCGAAAGTTGGTATTTGTTGGCATGTCATTAAGAACATATCTCGATGCAGCGTGGAAGGATGGAAAGGCACCCATTGACCCATCAAGTCTGGTAAAAGTGGAGGATATTGATACGTACTCCCCTAAAGATTTGTTAATTGTGACAACTGGCTCGCAAGCAGAACCACGAGCGGCCCTTAATCTTGCGTCATATGGAAGTAGTCATTCTCTCAAATTGAACAAGGAAGATATAATCTTGTATTCAGCTAAGGTGATACCCGGAAATGAATCTCGAGTTATGCAAATGTTGAATCGAATCTCAGAGATTGGGTCGACCATAGTTATGGGTAGAAACGAGGGATTGCACACATCAGGTCATGCATATCGAGGGGAATTGGATGAAATACTTAAAATTGTGAAGCCACAACATTTTGTTCCCATACATGGTGAACTCGTGTTCCTTAAAGAGCATGAGTTGCTGGGAAGGTCTACTGGCATTCGACACACTACTGTAATCAAGAATGGAGAAATGCTAGGGGTATCCCATTTGAGGAACAGAAGAGTTTTATCTAATGGCTTCACCTCTCTTGGGAAAGAGAAACTTCAGTTGAAATACAGCGATGGCGATAAGGCTTTTGGAACCTCGTCTGAGCTTTGCATTGAGGAGAGACTAAGAATCGCAACCGATGGCATTATTGTTGTCTGCATGGAAATTTTACGACCTCAAAACGGGGAAGGTCTAATCGAAAGGAGAATCAAAGGAAAGATAAGAATAACGACAAGGTGTTTATGGCTCGACAAAGGAAAGCTTCTAGATGCACTCCATAAAGCCGCTCATGCTTCGCTATCGAGCTGCCCTGTCAATAGCCCTCTACCCCACATGGAAAGAACGGTATCTGAGGTATTGCGGAAAATGGTAAGGAAGTATAGTGGGAAAAGGCCGGAGGTTATTACCATCGCCATTGAGAACCCTGCTGGAGTTCTTTCTGATGAGCATAGTTCGAGACTTTCCGGCAAGGATGGTAATGATTTTGGGAAATCGAGGAAGGCAGTTGATGAACATTTTAACAGAAGTGCATCAAATACAATAAAAGTAGAAGTCAATGGCAATGTGCATTTGGATACCGGCTTTCAACCAGAACTTGAAGGTGATTCTAATGGAAATGAAGGATTACTTCCCGAGGAAGATGAACTTACGCCAAGTACTGAATCTTCCCAAAAGGTTTCATCCTTGGACGAGAACTCGGAAAATTTCTGGGAAAAATTTGTCACCCCATTGACACCCATTGAAGAACAGGTGGAAGAAAACAACAGTGTTTTCCTTCCACGGCCAGATCTAACGGTGGACATTAAGAAAGAGGATGGTGAAATCAGCATCGATGAGTCCTTTGAAACGATGAATTCTCCTCCACAATTATCGAAGACTTCCAAACGGAATAGGTGGAAACCCGAAGAGGTTAAGAAGCTTCTTCAAATGCGGGGAGACCTACACGGAAGATTCCAAGTAGTGAAGGGGAGAATGGCTTTGTGGGAAGAGATTTCTAGAAACTTGTCGACTGATGGAATAGCACGGAGTCCCGGACAATGCAAATCTCTGTGGGCATCTTTAGTCCAGAAATACGAGAGTATTGAAATATGTCAACAGGAGTACAAGAATGTAGCGAAAAACACGAAAAGTTGGCCGTATTTCGACGAAATGAACAGAATTTTGACTGATTTTGAAGAAGTCGTAACGAAATGA 2751 42.71 MLFGVSGGSSPFLYMLPSALYRPKMAAFGLFSACPCSSLRGPYRPRRSVSCCVGPSSVTGTHVSKVPVKRSRRLEGAGKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRYIMIDAGVMFPDHDELGVQKIIPDTTFIKRWSHKIEAVIITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIRKRLKEHGLFVSSRLKVFTTKRKFQAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKIFDREALEKLSKEGVTLMMSDSTNVLSPGRTMSESTVADALKRHISAAKGRVITTQFASNIHRLGSVKAAADITGRKLVFVGMSLRTYLDAAWKDGKAPIDPSSLVKVEDIDTYSPKDLLIVTTGSQAEPRAALNLASYGSSHSLKLNKEDIILYSAKVIPGNESRVMQMLNRISEIGSTIVMGRNEGLHTSGHAYRGELDEILKIVKPQHFVPIHGELVFLKEHELLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFTSLGKEKLQLKYSDGDKAFGTSSELCIEERLRIATDGIIVVCMEILRPQNGEGLIERRIKGKIRITTRCLWLDKGKLLDALHKAAHASLSSCPVNSPLPHMERTVSEVLRKMVRKYSGKRPEVITIAIENPAGVLSDEHSSRLSGKDGNDFGKSRKAVDEHFNRSASNTIKVEVNGNVHLDTGFQPELEGDSNGNEGLLPEEDELTPSTESSQKVSSLDENSENFWEKFVTPLTPIEEQVEENNSVFLPRPDLTVDIKKEDGEISIDESFETMNSPPQLSKTSKRNRWKPEEVKKLLQMRGDLHGRFQVVKGRMALWEEISRNLSTDGIARSPGQCKSLWASLVQKYESIEICQQEYKNVAKNTKSWPYFDEMNRILTDFEEVVTK 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10101812 10109051 - Bda012511.1 Bda15g00661 22356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00661 916 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 458 502 IPR011108 -
Bda15g00661 916 PANTHER RIBONUCLEASE J 18 916 - -
Bda15g00661 916 CDD GT1 816 878 - -
Bda15g00661 916 Pfam Myb/SANT-like DNA-binding domain 815 906 IPR044822 -
Bda15g00661 916 MobiDBLite consensus disorder prediction 735 751 - -
Bda15g00661 916 MobiDBLite consensus disorder prediction 711 751 - -
Bda15g00661 916 Gene3D - 818 879 - -
Bda15g00661 916 Gene3D - 105 517 IPR036866 -
Bda15g00661 916 MobiDBLite consensus disorder prediction 670 685 - -
Bda15g00661 916 Gene3D - 553 659 - -
Bda15g00661 916 MobiDBLite consensus disorder prediction 666 685 - -
Bda15g00661 916 ProSiteProfiles Myb-like domain profile. 810 874 IPR001005 -
Bda15g00661 916 SMART Lactamase_B_5a 113 310 IPR001279 -
Bda15g00661 916 Gene3D - 302 452 IPR042173 -
Bda15g00661 916 SUPERFAMILY Metallo-hydrolase/oxidoreductase 101 515 IPR036866 -
Bda15g00661 916 CDD RNaseJ_MBL-fold 104 515 - -
Bda15g00661 916 Pfam Beta-lactamase superfamily domain 155 322 IPR001279 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00808 Bda15g00661 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00661 Bda-Chr15:10101812 Bda11g00876 Bda-Chr11:8614273 1.21E-06 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17201 PF12706 Lactamase_B_2 5.80E-11 CL0381 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00661 - - csv:101215740 1313.13